Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0308 ATGGCGGTTGATCTTCAATCTTTATCAGAGGCCACTTCTGGCGCCGTAGGAGCACTGCTGAGCACCACCATCTTGTACCCGCTTGACACCTGCAAGACCAAGTACCAAGCTGAGGTCAAAGCCCACGGCCAGCAAAAATACAGGAACCTCTCAGATGTATTATGGGAAGCCATCTCTACCCGTCAAATTGTTTCTCTGTATCAGGGTTTAGGGACAAAGAACCTGCAATCTTTCATTGCACAGTTTGTCTACTTCTATGGGTATAGCTGCTTCAAAAAACTATATTTGGAAAGAAGTGGCTTCAATTCCATTGGAACAAAAGCAAACTTGATTCTTGCAGCAGCTGCTGGGGCCTGTACTGCTATTGTGACTCAGCCCCTGGATACAGCCTCCTCGAGGATGCAGACAAGTGCTTTTGGGAAATCAAAAGGGCTTTGGCAAACCCTTACAGCTGGAACTTGGAGTGAAGCATTTGATGGTCTTGGAATCTCTCTTCTTTTGACCACAAATCCTGCAATTCAGTATACAGTATTTGATCAGCTGAAGCAAAGACACCTGAAGAGGAATCAGAACATAACAGAGAAGGGCTCATCCCCGGAAGCCCTTTCTGCCCTCTCAGCTTTCATGTTGGGTGCAATTTCAAAGAGTATTGCCACTTTTTTGACATATCCAGCAATCAGGTGTAAGGTCATGATTCAAGCAGCAGACACAAATGACGATGAAGCCAAGAAAGCTCCACAGAAATCCCACAAAACAGTACATGGTGTTCTTTATGCTATTTGGAAGAGAGAAGGGGTGCCAGGGTTCTTTAAGGGTTTGCAAGCTCAGATCCTGAAAACTGTACTAAGCTCAGCATTGCTTTTGATGATCAAGGAGAAAATTGCAGCAGGCACTTGGGTACTAATACTTGCAGCTAGAAAGTATCTATTGCTCACAGGGAGTAGACTGAAGAGTGCTCAGAAGCCATAG 969 0.451 MAVDLQSLSEATSGAVGALLSTTILYPLDTCKTKYQAEVKAHGQQKYRNLSDVLWEAISTRQIVSLYQGLGTKNLQSFIAQFVYFYGYSCFKKLYLERSGFNSIGTKANLILAAAAGACTAIVTQPLDTASSRMQTSAFGKSKGLWQTLTAGTWSEAFDGLGISLLLTTNPAIQYTVFDQLKQRHLKRNQNITEKGSSPEALSALSAFMLGAISKSIATFLTYPAIRCKVMIQAADTNDDEAKKAPQKSHKTVHGVLYAIWKREGVPGFFKGLQAQILKTVLSSALLLMIKEKIAAGTWVLILAARKYLLLTGSRLKSAQKP* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0308 322 FunFam Peroxisomal adenine nucleotide carrier 1 3 298 - -
Vvi14g0308 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Vvi14g0308 322 Gene3D Mitochondrial carrier domain 3 297 IPR023395 -
Vvi14g0308 322 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Vvi14g0308 322 Pfam Mitochondrial carrier protein 6 97 IPR018108 -
Vvi14g0308 322 Pfam Mitochondrial carrier protein 105 186 IPR018108 -
Vvi14g0308 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Vvi14g0308 322 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Vvi14g0308 322 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Vvi14g0308 322 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Vvi14g0308 322 SUPERFAMILY Mitochondrial carrier 8 293 IPR023395 -
Vvi14g0308 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 297 IPR018108 -
Vvi14g0308 322 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 318 IPR045900 GO:0005347|GO:0006635|GO:0015217
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0308 Vvi-Chr14 3013891 3016977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0308 23 286 Chloroplast and Mitochondria Gene Families AT1G25380 28.417 1.28e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0308 - - vvi:100244263 615.15