Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0293 ATGGGTGCTGTGACCCTCTTGGCTCTGGGTAATGGGGCTCCAGACGTCTTTGCGTCGGTGGCCGCTGTGCGTGGCGGGCATCCGAGGACTGGTTTTGGGGCGATTTTGTCGGCCGGTACGTTTGTTTCGGCGTTTGTGGTTGGGTTTGTGGCGATTTATGCCGCGCCGTTTTCGGTGGACCCGAGTCAGTTTGTGAGGGACGTGTTCTTTTACTTGGTGGCTGCGTTGTTCTTGTTCTATGTGTATTTGAGCGCGGAGATTTTTCTGTGGCAGGCTATTGGGTTTGTGGGGTTTTATGCGTTTTTTGTCGGGTTGGTGTTTTGGATGGATTTGGGGATTGGTGGAGGGAAGGAGAGAGGTGGGAGTGAGGTGGGGTTGATTGGGGAGGTCGAGATTGAGAAGGGTTTGGTGGGTTCTGGGGTTTTTGAGATTGGGGATGTGTTGAAGGATGTGGAGAGAGGGAAGGCCGGTTTCGGGTTCGGTGATGCACTTGGCAAGATCTCGAAAGCATGGGAACTTCCAGTTTCTTTACTTCTAAAGCTCACAATCCCACAAACTGAACCTTCAGAATGGAATAGGTTCTATCAATCTGCAAATATTGCTCTTTGCCCACTTGCCCTTTTGTACTCCTGTAATTCATTCATACCACTAAATCATCCCATCATTTTTCTCCTTCCACACACTCATTTTCCATTATGGTCTGTCGTACTCTTTGCAAGCTCCTCCCTTGCAGTTCTTCACTTCATAATAGAAAAAGAGCCCCCTGAAACTGAAAGAATGCCTGTGGTTCTTGTAGCCTTTATAATGAGTGTCTTTTGGATATCTACTGTTGCTGGGGAGCTCCTGAACTGCCTTGCAGCATTAGGGTCACTTCTTGAATTGCCTCCATCACTCCTTGGGCTCACAGTACTTGCATGGGGAAACTCAGTGGGAGATCTTGTTGCTGATGTGGCCATTGCCAAAGCAGGCCAGCCAGCAATGGCAATGGCTGGGTGCTTTGCTGGCCCAATGTTTAACATGCTTGTTGGACTTGGGACAGCTTTGGTGATACAAACTGCTAATATTTATCCCCAAGCTTATCAGCTCCATTTCCACACGGGTATTGTGATTGCATTTGTGTTCTTGCTGTCAAGCTTGATGGGGTCTCTGTTAGTTATAACTTGGGGTAGATTCCGGGTGCCTAGGTTCTGGGGTTTCTGCCTTGTTGGTCTCTATGTTGTATTTATGGTTGTTAGCATACTCATCGCAAAGTTTTCAGGCATGTTTTCACAGATCAACTTCTATATTTTGCACTTACCAGCCTGTTTTTCTTGCTTATTGTCAATTACTGCTGAATGTTACTTCTGGTTTATTTATATGTTGGAGGACATGGTAACTAGCAGACCCACTTTCTCAGCAACCATACCCTACCACCCATTGGCTCACCTTACTGAAATTTTTGTTCATGAGTTTATCACTGTCGCTTTGAGAATCTGA 1476 0.4675 MGAVTLLALGNGAPDVFASVAAVRGGHPRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVDPSQFVRDVFFYLVAALFLFYVYLSAEIFLWQAIGFVGFYAFFVGLVFWMDLGIGGGKERGGSEVGLIGEVEIEKGLVGSGVFEIGDVLKDVERGKAGFGFGDALGKISKAWELPVSLLLKLTIPQTEPSEWNRFYQSANIALCPLALLYSCNSFIPLNHPIIFLLPHTHFPLWSVVLFASSSLAVLHFIIEKEPPETERMPVVLVAFIMSVFWISTVAGELLNCLAALGSLLELPPSLLGLTVLAWGNSVGDLVADVAIAKAGQPAMAMAGCFAGPMFNMLVGLGTALVIQTANIYPQAYQLHFHTGIVIAFVFLLSSLMGSLLVITWGRFRVPRFWGFCLVGLYVVFMVVSILIAKFSGMFSQINFYILHLPACFSCLLSITAECYFWFIYMLEDMVTSRPTFSATIPYHPLAHLTEIFVHEFITVALRI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0293 491 Gene3D - 197 416 IPR044880 -
Vvi14g0293 491 Pfam Sodium/calcium exchanger protein 263 413 IPR004837 GO:0016020|GO:0055085
Vvi14g0293 491 Pfam Sodium/calcium exchanger protein 4 107 IPR004837 GO:0016020|GO:0055085
Vvi14g0293 491 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 165 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0293 Vvi-Chr14 2909953 2914570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0293 1 419 Antiporters AT1G08960 72.577 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0293 K13754 - vvi:100256252 784.637