Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0285 ATGGAAACCAACACCACTGCTACTCCTGCAAGTCCACCTGCAAACAACCATACCCATATTCACCATCACTCTCATTCACAACCGGATACCCATCACCATGGCATTCTCCCCTCCGATTCCATGCTTGTTATCATCATACCCACCATCTCAATTTTGCTCCTTGTTGCCATAATTGTAATTGTAATAATGCTCCGGCGACTCAAATCTGCAAAAAACAGAGGCAACAGCAAAAGCAATAGCAGCAGCAGCGGAAACCAGAATTGCAACTTCATTGCTCATACTGCTATAAACTTCAATTCTAGCCCAGATGTGAAGAGTGGGTGTTTATATGGAGGAAGTTTGATCCGTACACCTGCAAGTAGATTTAAAGGAGTTCAAGTATTCACATACAAGGAGCTTGAAATGGCCACAGATAAGTTCAGTGAAGCCAATGTGATAGGGAATGGAGGGTTCGGAGTGGTGTACAGAGGAGTCCTTAGCGATGGGACTGTGGCAGCTATCAAGGTGCTGCGCAGGGATGGGAAGCAAGGGGAGCGTGCATTCAGGATGGAGGTGGACCTACTGACCCGTTTACACTCTCTTTACTTGGTGGAGCTGCTTGGCTACTGTGCAGACCAACACTACAGGCTTCTGATATTTGAATACATGCCTAATGGTACATTGCAAAGCCAACTCCACCCCTCCCACAACCAACAGAGAGTGTTGGATTGGGGGACACGGTTGAGGGTGGCCCTTGATTGTGCTAGGGCCCTTGAGTTCCTCCATGAGCATGCAGTCCCCTCGATCATTCACCGTGATTTCAAGCCCAGCAACATTCTCCTAGATCAAAATTTCAGAGCCAAAGTCTCTGATTTTGGCTTGGCCAAGACAAGTTCTGACAAGATCAATAGTCAGATTCCGACTCGGGTAATTGGGACCACTGGATATCTAGCCCCCGAGTATGCTTCATCAGGAAAGCTTACTACAAAATCAGATGTGTATAGCTATGGTGTGGTTCTTCTAGAGCTCTTAACGGGCCGTGTACCACTTGATACCAAGCGCCCCCCTGGAGAGGATGTCCTGGTCTCATGGGCTCTTCCAAGGTTAACTAACAGGCAAAAACTAGTGGAAATGGTTGACCCAGCTCTACAAGGCCGCTACTCAAAGAAGGATCTAATTCAGATAGCCGCTATTGCAGCTGTGTGTGTGCAACATGAAGCAGATTACCGGCCCCTAATGACAGATGTTGTGCAGTCACTAATCCCTCTGGTTAAGAATCACTCTTCTGTTAGTTCCTCTTGTTCCTCCAGATTTCAGATGCTGAGCCCAAGGTATTAG 1317 0.473 METNTTATPASPPANNHTHIHHHSHSQPDTHHHGILPSDSMLVIIIPTISILLLVAIIVIVIMLRRLKSAKNRGNSKSNSSSSGNQNCNFIAHTAINFNSSPDVKSGCLYGGSLIRTPASRFKGVQVFTYKELEMATDKFSEANVIGNGGFGVVYRGVLSDGTVAAIKVLRRDGKQGERAFRMEVDLLTRLHSLYLVELLGYCADQHYRLLIFEYMPNGTLQSQLHPSHNQQRVLDWGTRLRVALDCARALEFLHEHAVPSIIHRDFKPSNILLDQNFRAKVSDFGLAKTSSDKINSQIPTRVIGTTGYLAPEYASSGKLTTKSDVYSYGVVLLELLTGRVPLDTKRPPGEDVLVSWALPRLTNRQKLVEMVDPALQGRYSKKDLIQIAAIAAVCVQHEADYRPLMTDVVQSLIPLVKNHSSVSSSCSSRFQMLSPRY* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0285 438 FunFam Receptor-like serine/threonine-protein kinase ALE2 216 430 - -
Vvi14g0285 438 MobiDBLite consensus disorder prediction 1 33 - -
Vvi14g0285 438 Gene3D Transferase(Phosphotransferase) domain 1 216 433 - -
Vvi14g0285 438 Pfam Protein kinase domain 141 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0285 438 SUPERFAMILY Protein kinase-like (PK-like) 121 413 IPR011009 -
Vvi14g0285 438 ProSiteProfiles Protein kinase domain profile. 140 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g0285 438 Gene3D Phosphorylase Kinase; domain 1 114 215 - -
Vvi14g0285 438 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Vvi14g0285 438 PANTHER OS01G0750732 PROTEIN 13 421 - -
Vvi14g0285 438 CDD STKc_IRAK 146 416 - -
Vvi14g0285 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Vvi14g0285 438 FunFam Serine/threonine-protein kinase PBS1 109 215 - -
Vvi14g0285 438 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0285 Vvi-Chr14 2840389 2843114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0285 124 433 Receptor kinase-like Gene Family AT3G58690 62.222 3.28e-144 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vvi14g0285 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0285 - - vvi:100259692 801.586