Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0211 ATGGCTTGGAGAGAGGTTGGGAAAAAGAGCATTTGTGCCAATCTCACAAAAGCTTTGGCTTCAACAAAATCTAGAGATGTTCCTGATCCACTTTCCACGCCTATTTTGGAAGATGCGCTGAAATCAATTTCTTCTTCCATCAAACATGTACCAGTGTTTTCTGCGAGCAAATCGTCATTGGGTGCTGATAAGTGCCAGATTTTGCCCAACCGACCCTTAACACGGCGTTTTCATGCAAGTCCTGGACTATTGGCTAGAAGAAGAAGTGATGAACCATTTGGTTTGAAGACTCCGAAGAGAGAGAAGTATGTGAAAAGAGAGAGTAAGATGCAACCGCCTGTCGAAGCTCCTTATGTGCATCCTAAACCCAAAAGAACTACCAAATCATTACCAGATAGAACAATTGACATATTTGAGGGCATGACCATTGGTGAACTTGCTAAGCATACCAATGAGTCAATATCTACTTTGCAGGAAATTCTTGTAAATGTAGGGGAAAAGTTTGACTCAGAGTTTGACACTCTCAGCATTGACATTGCAGAGCTGGTAGCAATGGAAACTGGGGTCAATGTTCGGAGGCTGCATTCCAATGAAGGGGCAGAAATTTTTCCTCGGCCTGCTGTAGTAACAGTCATGGGTCATGTTGACCATGGTAAAACTTCTCTTTTAGATGCTCTACGTCAAACATCAGTGGCAGCCAGGGAAGCTGGGGGCATTACTCAGCATCTTGGTGCATTTGTTGTGAGCATGCCATCAGGAGCATCAATCACATTCCTCGACACACCTGGTCATGCCGCATTTAGTGCTATGCGAGCAAGAGGTGCTGCAGTCACAGATGTAGTTGTCCTAGTGGTGGCCGCTGATGATGGTGTGATGCCCCAAACTCTTGAGGCCATGTCTCATGCCAAAGCAGCTAAAGTACCAATTGTGGTTGCAATTAATAAATGTGATAAACCAGCTGCAGACCCAGAAAGAGTAAAAGTCCAGCTTGCTTCAGAGGGGTTGCTGCTGGAGGAGATGGGTGGCGACGTTCAGGTGGTTGAAGTTTCAGCAGTAAATAAAACTGGCTTGGATAACTTGGAAGAGGCTTTGCTTCTCCAGGCAGATTTGATGGATCTGAAAGCACGTATTGATGGGCCTGCTCAAGCTTATGTGGTGGAAGCAAGACTTGATAGGGGTCGCGGTCCATTGGCTACCGCCATAGTGAAGGCAGGGACCTTAGTTTGTGGCCAACATGTGGTTGTGGGTGCAGAGTGGGGCAGAATAAGAGCTATTAGGGATATGATGGGGAATTTGACAGATAAGGCTAAGCCCGCCATGCCTGTCGAGATTGAAGGGTTGAGAGGGCTTCCAATGGCTGGTGATGACATCATTGTTGTGGAATCTGAGGAAAGAGCTAGAATGCTTAGTGCAGGGAGGAAAAAGAAATATGAGAAAGATAGGCTTAGAAAGATTGATGAGGGGAGAACAGAAGCTCCAGAACCATCAGAAGATGTGCCTGAGAGGGTTGAAATGCCGATTATAGTGAAAGCAGATGTGCAGGGCACAGTCCAAGCAGTCACAGATGCATTGAAGAGTTTAAATAGTCCTCAGGTTTTTGTGAATGTAGTCCATGTTGGCGTTGGGCCTATCTCTCAGTCTGATGTCGACTTGGCACAAGCTTGTCATGCCTGTATAGTTGGATTCAATGTGAAGAATCCACCTACTTCTCTCAGTCAGGCTGCATCTCGAGCTAGTATAAAGGTAAAAATACATCGTGTGATATATCACCTTCTGGAGGACATTGGCAATTTGATTGTAGATAAGGCCCCTGGGACTTTTGAGACCCAGGTAGCCGGGGAGGCTCAGGTGCTGAACATATTTGAGCTCAAAGGTAGGAGCAAATCCAAGGGAGATGATGTGAAGATTGCTGGCTGCCGGGTGATAGATGGGCGTGTGACCAAGTCCTCAACCATGAGGCTTTTGAGGAGTGGGGAAGTTATGTTTGAAGGGTCATGTGTCTCCCTCAAGCGGGAGAAGCAGGATGTGGACACAGTTGGCAAGGGGAATGAGTGTGGACTTGTGATCGGAGACTGGGATGATTTCCAGATTGGAGACGTCATCCAGTGCTTGGAGCAAGTGAATAGGAAGCCCAAGTTCATTTCTTCAGAGAGTGGGGCTGTTCGAATCGAGTGCTGA 2178 0.4669 MAWREVGKKSICANLTKALASTKSRDVPDPLSTPILEDALKSISSSIKHVPVFSASKSSLGADKCQILPNRPLTRRFHASPGLLARRRSDEPFGLKTPKREKYVKRESKMQPPVEAPYVHPKPKRTTKSLPDRTIDIFEGMTIGELAKHTNESISTLQEILVNVGEKFDSEFDTLSIDIAELVAMETGVNVRRLHSNEGAEIFPRPAVVTVMGHVDHGKTSLLDALRQTSVAAREAGGITQHLGAFVVSMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAMSHAKAAKVPIVVAINKCDKPAADPERVKVQLASEGLLLEEMGGDVQVVEVSAVNKTGLDNLEEALLLQADLMDLKARIDGPAQAYVVEARLDRGRGPLATAIVKAGTLVCGQHVVVGAEWGRIRAIRDMMGNLTDKAKPAMPVEIEGLRGLPMAGDDIIVVESEERARMLSAGRKKKYEKDRLRKIDEGRTEAPEPSEDVPERVEMPIIVKADVQGTVQAVTDALKSLNSPQVFVNVVHVGVGPISQSDVDLAQACHACIVGFNVKNPPTSLSQAASRASIKVKIHRVIYHLLEDIGNLIVDKAPGTFETQVAGEAQVLNIFELKGRSKSKGDDVKIAGCRVIDGRVTKSSTMRLLRSGEVMFEGSCVSLKREKQDVDTVGKGNECGLVIGDWDDFQIGDVIQCLEQVNRKPKFISSESGAVRIEC* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0211 725 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 499 613 IPR036925 -
Vvi14g0211 725 Gene3D Translation factors 377 490 - -
Vvi14g0211 725 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 204 374 IPR000795 GO:0003924|GO:0005525
Vvi14g0211 725 SUPERFAMILY Translation proteins 608 709 IPR009000 -
Vvi14g0211 725 CDD IF2_mtIF2_II 380 475 IPR044145 -
Vvi14g0211 725 FunFam Translation initiation factor IF-2 201 376 - -
Vvi14g0211 725 Pfam Elongation factor Tu GTP binding domain 209 365 IPR000795 GO:0003924|GO:0005525
Vvi14g0211 725 NCBIfam small GTP-binding protein domain 207 360 IPR005225 GO:0005525
Vvi14g0211 725 Hamap Translation initiation factor IF-2 [infB]. 4 711 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Vvi14g0211 725 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 124 718 IPR015760 -
Vvi14g0211 725 Pfam Translation-initiation factor 2 501 595 IPR023115 -
Vvi14g0211 725 CDD mtIF2_IVc 613 703 - -
Vvi14g0211 725 Gene3D - 202 376 IPR027417 -
Vvi14g0211 725 FunFam Translation initiation factor IF-2 608 712 - -
Vvi14g0211 725 FunFam Translation initiation factor IF-2 500 606 - -
Vvi14g0211 725 CDD IF2_eIF5B 208 371 - -
Vvi14g0211 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 395 IPR027417 -
Vvi14g0211 725 MobiDBLite consensus disorder prediction 103 129 - -
Vvi14g0211 725 Gene3D - 501 605 IPR036925 -
Vvi14g0211 725 Gene3D Translation factors 607 711 - -
Vvi14g0211 725 NCBIfam translation initiation factor IF-2 133 710 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Vvi14g0211 725 SUPERFAMILY Translation proteins 378 461 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0211 Vvi-Chr14 1777962 1783906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0211 195 689 Eukaryotic Initiation Factors Gene Family AT1G76810 26.118 1.62e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0211 K02519 - vvi:100266672 1384.39