Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0197 ATGGGGCATTTTTCATCCATGTTCAATGGATGGGCGAGGTCCTTTTCTATCAAAAAAGCGAGCAGTTCAGGGAATTGTGGTGGAAGAGAGGCTGTTGAAGTAATGGCAAAGGAGGCGAAGAAGAATGATTTGATACTGCACTCTTCCGGGTTTGTTAATGTCAATGGTTCAAACAATTTCACTTCCCTTTACTCAAAGCGAGGCGAAAAGGGTGTGAATCAGGATTGCTTCATTGTGTGGGAGGAATTTGGAGGGCAAGAGGATATGCTCTTTTGTGGGGTTTTTGATGGTCACGGGCCATGGGGTCATTATGTGGCAAAAAGGGTCAGAGAATCAATGCCATCTTCTTTGTTGTGCAATTGGCAGGAAACCCTTGCTGAAGCCTCACTTGACCCAGATTTTGACTTGCAAGCAGAAAAAAAGCTTCACCGGTTTAATATATGGAAGCATTCCTACTTAAAAACTTGTGCTGCTATTGATCAAGAGCTTGAGCATCATCGTCGAATCGATTCCTTCAACAGTGGGACAACAGCACTTACCATTGTTAGACAGGGGGAAAGCATTTTTGTAGCAAATGTCGGTGACTCACGTGCTGTATTGGCTACCATGTCTGATGATGGCAACTTGGAACCAGTTCAACTTACTATTGATTTCAAACCGAATCTACCTCAGGAGGCTGAGCGGATAATTCAGTGCAAAGGGCGAGTGTTCTGTTTAGGCGATGAGCCAGGAGTGCACAGGGTCTGGCTTCCCCATGAGGAATCACCAGGACTGGCTATGTCTAGAGCCTTTGGGGATTACTGTGTGAAGGATTTTGGACTCATTTCTGTGCCTGAAGTGACACAGAGGAACATAACCAGCAGAGACCAATTTGTTGTGCTTGCAACTGATGGGGTCTGGGATGTTGTCTCAAATCAAGAAGCAGTGCAAATAGTATCTTCAACACCCAACAGAGCGAAGTCAGCCAAGCGTCTAGTTGAGTGTGCAGCCCGTGCTTGGAAACGCAAGAGGCGGGGAATTGCAGTGGATGACATCTCAGCTGTTTGTCTCTTCTTCCACCCTTGTTCCATTCAGCAAGTTACTGTACCAAAAGAGTCATGA 1101 0.4587 MGHFSSMFNGWARSFSIKKASSSGNCGGREAVEVMAKEAKKNDLILHSSGFVNVNGSNNFTSLYSKRGEKGVNQDCFIVWEEFGGQEDMLFCGVFDGHGPWGHYVAKRVRESMPSSLLCNWQETLAEASLDPDFDLQAEKKLHRFNIWKHSYLKTCAAIDQELEHHRRIDSFNSGTTALTIVRQGESIFVANVGDSRAVLATMSDDGNLEPVQLTIDFKPNLPQEAERIIQCKGRVFCLGDEPGVHRVWLPHEESPGLAMSRAFGDYCVKDFGLISVPEVTQRNITSRDQFVVLATDGVWDVVSNQEAVQIVSSTPNRAKSAKRLVECAARAWKRKRRGIAVDDISAVCLFFHPCSIQQVTVPKES* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0197 366 FunFam Probable protein phosphatase 2C 34 51 354 - -
Vvi14g0197 366 SUPERFAMILY PP2C-like 57 354 IPR036457 -
Vvi14g0197 366 SMART PP2C_4 52 350 IPR001932 -
Vvi14g0197 366 Gene3D - 53 354 IPR036457 -
Vvi14g0197 366 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Vvi14g0197 366 CDD PP2Cc 62 352 IPR001932 -
Vvi14g0197 366 PANTHER PROTEIN PHOSPHATASE 43 350 IPR015655 GO:0004722|GO:0006470
Vvi14g0197 366 Pfam Protein phosphatase 2C 84 325 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0197 Vvi-Chr14 1655994 1659181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0197 1 353 PP2C-type Phosphatase Gene Family AT3G05640 72.753 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0197 - - vvi:100251160 749.199