Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0186 ATGAACACAATCTCTGGTGTCTTCTTCATCCTAATTCTTGCCTTCTGGCCACATCAAATCTTGGCCCAAGAGGACCAGGACTTAGGATTAATCATACCAAATCAGAAATCATCATTAGGGGAGGAGCTGATCGCCCAAGTTTGTGATCATGCAATCTACAAGGATCTGTGCATAAGTTCCCTACAATCAGTCCCAGAAAGCAAGGATGCAGACCTCTTTGAGCTTACCACAATTGCACTAAAACTTGCTGCAACAAATGCTACTGAAATCAAAAAATATGTTCAGAAGTTGCTTAACAAGTCTCATTCAGACCGCTATACACACCAATGCCTAGCTGATTGTTCCGAAAACTATGAAGATGCGCTGGATCGGATTGAGGACTCATTGAAAGCTCTGGAATCCAAGGGATACAATGATGTTAACACATGGGTGACCGCTGCCATGGCGGATGCCGAGTCATGTGAGGAGGGGTTCCTTGATCGTCCAGGCCATAAGTCTCCATTGACTGGTAGAAGCACAATATTTAACCAGCTATGCAGTATTGCTTTAACCATTACCAACTTCTTATCTGGTAGTGTTTGA 582 0.4347 MNTISGVFFILILAFWPHQILAQEDQDLGLIIPNQKSSLGEELIAQVCDHAIYKDLCISSLQSVPESKDADLFELTTIALKLAATNATEIKKYVQKLLNKSHSDRYTHQCLADCSENYEDALDRIEDSLKALESKGYNDVNTWVTAAMADAESCEEGFLDRPGHKSPLTGRSTIFNQLCSIALTITNFLSGSV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0186 193 Coils Coil 115 135 - -
Vvi14g0186 193 PANTHER PECTINESTERASE INHIBITOR-LIKE 23 190 - -
Vvi14g0186 193 NCBIfam pectinesterase inhibitor domain 37 189 IPR006501 GO:0004857
Vvi14g0186 193 FunFam Putative invertase inhibitor 41 189 - -
Vvi14g0186 193 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 190 IPR035513 -
Vvi14g0186 193 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 189 IPR035513 -
Vvi14g0186 193 SMART PMEI_2 39 185 IPR006501 GO:0004857
Vvi14g0186 193 Pfam Plant invertase/pectin methylesterase inhibitor 43 185 IPR006501 GO:0004857
Vvi14g0186 193 CDD PMEI-like_1 43 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0186 Vvi-Chr14 1561321 1561902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0186 47 193 Carbohydrate Esterase AT1G53840 29.487 1.16e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0186 - - vvi:100854576 387.111