Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0167 ATGATGATGATGACAATGGAGGGAATGATGGATAAGGGCGTGTTGGAAGATATCATAAGGCGGCTTTTGGATGGAAAAGGAGGCAAACAGGTACAGCTTTCGGAGGCTGAGATCCGCCACCTCTGCGTCAACGCTCGCCACGTTTTTCTTTCTCAGCCCAACCTCCTCCAGCTTCATGCCCCTATTCGGATCGCTGGTGATATACATGGACAGTACCAAGACTTATTGAGGCTATTTGAATACGGTGGATTCCCTCCTGCTGCAAACTACCTCTTTCTTGGAGATTATGTAGATCGTGGAAAGCAAAGTCTGGAAACAATATGTTTGCTTCTGGCTTACAAAATAAGATATCCTGACAACTTTTACCTCTTGAGGGGAAACCATGAAGATGCAAAGATCAATCGGATTTATGGCTTTTATGATGAATGTAAAAGGAGGTTTAATGTTAGGCTTTGGAAGATATTCACCGACTGCTTCAACTGTTTGCCTGTGGCTGCACTCATTGATGAAAAGATACTTTGTATGCATGGGGGCCTCTCTCCCGAGTTGCAAAATTTGAATCAAATTAAGGAAATTCAGAGACCTACTGATGTTCCAGATAGCGGTCTCCTTTGTGATCTGCTTTGGTCTGATCCTGATGCTAGAGTTGATGGTTGGGCAGATAGTGATCGAGGTGTTTCTTGTACCTTTGGAGCTGATAAGGTTGCTGAATTTTTGGACAAGAATGATCTTGATCTCATTTGCCGAGGTCATCAGGTGGTGGAGGATGGATATGAATTCTTTGCTAAACGACGATTAGTCACAATTTTTTCAGCACCAAACTATGGTGGAGAGTTTGATAATGCCGGTGCTCTTTTGAGTGTTGATAAAGATCTAGTATGCTCCTTTGAGATAATGAAACCAGTTGATAATAAAGCATCATTGAGCGGTTCTACTGTACCTAAGTTGAATCTTAAGAAGCCCATAAAACCTGGAAAGATCTGA 984 0.4248 MMMMTMEGMMDKGVLEDIIRRLLDGKGGKQVQLSEAEIRHLCVNARHVFLSQPNLLQLHAPIRIAGDIHGQYQDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDNFYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELQNLNQIKEIQRPTDVPDSGLLCDLLWSDPDARVDGWADSDRGVSCTFGADKVAEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDKDLVCSFEIMKPVDNKASLSGSTVPKLNLKKPIKPGKI* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0167 327 FunFam Serine/threonine-protein phosphatase 5 310 - -
Vvi14g0167 327 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Vvi14g0167 327 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Vvi14g0167 327 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Vvi14g0167 327 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Vvi14g0167 327 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Vvi14g0167 327 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Vvi14g0167 327 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Vvi14g0167 327 SUPERFAMILY Metallo-dependent phosphatases 22 304 IPR029052 -
Vvi14g0167 327 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Vvi14g0167 327 SMART pp2a_7 33 303 IPR006186 GO:0016787
Vvi14g0167 327 CDD MPP_PP1_PPKL 14 301 - -
Vvi14g0167 327 Pfam Serine-threonine protein phosphatase N-terminal domain 15 58 IPR031675 -
Vvi14g0167 327 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 19 307 - -
Vvi14g0167 327 Pfam Calcineurin-like phosphoesterase 62 253 IPR004843 GO:0016787
Vvi14g0167 327 Gene3D - 9 311 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0167 Vvi-Chr14 1438419 1441920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0167 62 246 Calmodulin-binding Proteins AT5G63870 33.182 9.85e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0167 K06269 - vvi:100240815 669.077