Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0155 ATGGCAACTTTTGCCAAACCAGAGAATGCTTTGAAGCGAGCTGAAGAGTTGATCAATGTGGGGCAGAAGCAAGATGCCTTGCAAGCACTTCATGATCTTATCACCTCAAAGAGGTACCGAGCCTGGCAGAAGACACTTGAAAGGATCATGTTCAAATATGTAGAGCTTTGTGTTGACATGCGGAGGGGTAGGTTTGCTAAGGATGGTCTGATCCAATACCGTATTGTATGTCAACAAGTGAATGTTACTTCTTTGGAGGAAGTAATCAAACACTTCATGCATCTGTCTACTGAGAAAGCAGAACAAGCACGAAATCAGGCACAGGCCCTGGAAGAAGCTCTTGATGTTGATGACCTTGAAGCAGATAAAAGACCGGAAGATCTAATGTTAAGTTATGTCAGTGGAGAGAAAGGAAAGGATAGATCTGACCGTGAGCTTGTTACCCCTTGGTTTAAATTTTTGTGGGAGACCTATAGAACAGTGCTGGAAATATTACGAAACAACTCAAAGTTGGAAGCACTTTATGCGATGACAGCACACCGGGCCTTCCAGTTCTGCAAACAATACAAACGAACAACAGAGTTCCGCAGACTCTGTGAAATAATCAGAAATCATCTATCAAACCTTAACAAATATAGGGACCAAAGGGACCGACCTGACTTATCGGCTCCTGAAAGCTTACAGCTTTATCTTGATACGAGATTTGAGCAGCTAAAGATTGCTACTGAACTCGAACTTTGGCAGGAAGCGTTTCGCTCTGTTGAAGATATTCATGGATTGATGTGCATGGTTAAGAAAACCCCCAAAGCATCTTTGATGGTCGTTTATTATGCCAAGTTAACAGAAATATTCTGGGTTTCATCCAGTCATCTCTATCATGCTTATGCATGGTTCAAGCTTTTTTCATTGCAGAAGAGCTTCAATAAGAATTTAAGTCAGAAGGACTTGCAATTGATTGCATCATCTGTTGTTTTGGCTGCACTTTCAGTGACTCCCTATGATCTCACACGTGGTGCATCTCATTTGGAACTAGAAAATGAGAAAGAGCGCAATCTCAGGATGGCTAATCTTATAGGATTCAATCTGGAACCTAAACTTGATGGTAGAGAAGTGCTATCTCGGTCTGCTCTTCTTTCAGAACTGGTCTCTAAAGGTGTTATGACCTGCGTTACTCAAGAGGTAAAGGATCTGTATCATCTTCTAGAGCACGAATTTCTGCCTCTAGATCTTGCATCGAGGGTACAGCCCTTGTTAGCAAAAATTTCAAAACTTGGGGGCAAGCTTTCTTCAGCTTCTTCTGTTTCTGAAGTGCAACTGTCCCAGTATGTTCCGGCCCTGGAAAAGCTTGCCACCCTGAGGTTGCTTCAGCAGGTGTCTCAAGTGTATCAGACTATGAAAATTGAGAGCTTGTCTAAGGTGATCCAATTTTTTGATTTCTCTGTCGTGGAGAAGATCTCTGTGGATGCTGTCAAACATGGCTTTATTGCAATGAAAGTTGACCACATGAAGGGTGTCATCTTGTTTGGAAATTTGGGTCTTGAATCTGATAGGATGCGGGATCACCTCACTGTTTTTGCTGAATTTTTAAATAAAGCAAGGGCTCTGATACATCCACCTGCCAAGAAAGCATCAAAATTGGGTGACATGCTTTCAGGTTTAGCAGAGACTGTGGATAAGGAACACAAGAGGCTTCTTGCTCGGAAATCAATTATAGAGAAACGCAAGGAAGAGCAAGAACGCCAACTGTTGGAAATGGAGCGTGAGGAGGAGTCAAAGAGGCTTAAGCTACAAAAGATAACTGAAGAGGCAGAACAGAAAAGGCTTGCATCCGAGTATGAGCAAAGGAAAACTCAAAGGATCCTTAGAGAAATTGAGGAGCGGGAACTTGAAGAAGCACAGGCACTACTGCAGGAAGCTGAGAAGCGTAGCAAAAAGAAGGGAAAGAAGCCTATTGCAGAGGGAGAAAAGGTTACCAAGCAATCTTTGATGGAGCTGGCCCTGAGTGAGCAACTTAGGGAGAGACAGGAAATGGAGAAGAAGTTGCAAAAACTGGCGAAAACAATGGATTATTTGGAAAGAGCTAAAAGAGAAGAGGCAGCTCCTTTAATTGAAGCTGCATTTCAACAGCGTCTAGTGGAAGAGAAGGCGTTTCATGAACATGAGCAGCAGCAAGAGATTGAAGTCAGTAGACAGCGCCACGATGGAGACCTCAGGGAGAAAAATAGACTGGTCCGGATGTTGGACAAAAAGGAAAGAGTTATGAACCGTCGGCAAGCAGAATATAGCAGACTGAGAGCAGAGAGAGAGGAGCGAATCAGTCAAATCATACAGAGTCGGAAACAGGAGAGGGAAGCTAAGAGGAAGATGTTATTCTACTTGAGGTCAGAAGAGGAAAGGATGAAAAAGGCACGTGAAGAGGAGGAAGCCCGTAAGCGTGAAGAGGCTGAGAGGCGGAGAAAAGAAGAAGCTGAACGAAGGGCGAAGTTGGATGAGATAGCTGAGAAGCAGAGGCAAAGAGAACGGGAACTGGAAGAAAAAGAAAAGCTTAGGAGAGAAGCTCTCTTGGGTAGGCCAACTGAGGTGCCTCCCAAACCTTCTGAGCCCCCTACTGGAGGTCGCCCGCTGGAGCCTGGATCTGCTGCTCCAGCTGCAGCTGCTGCTGCTGCCGCACCAGCGTCTGGAAAATATGTGCCCAAGTTTCGTAGAGAGAGAGGTGAAAGTGCTGTACAGGCCCCACCCCCAGAACCCGACCGATGGGGAAGCAGGGGGGCTCCTAATCCAGAATCCGATCGATGGGGCAGCAGGCAGGACGATCGTCCACCTCAACCGAGTGACAGATGGCGTAGAGACGACCGAGGAAGCTCTTTCGGTTCAGGTGGTGGCTCAAGGTCTTCTACTTGGTCTTCTTCCCCCAGACGCTGA 2922 0.4555 MATFAKPENALKRAEELINVGQKQDALQALHDLITSKRYRAWQKTLERIMFKYVELCVDMRRGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARNQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLSNLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCMVKKTPKASLMVVYYAKLTEIFWVSSSHLYHAYAWFKLFSLQKSFNKNLSQKDLQLIASSVVLAALSVTPYDLTRGASHLELENEKERNLRMANLIGFNLEPKLDGREVLSRSALLSELVSKGVMTCVTQEVKDLYHLLEHEFLPLDLASRVQPLLAKISKLGGKLSSASSVSEVQLSQYVPALEKLATLRLLQQVSQVYQTMKIESLSKVIQFFDFSVVEKISVDAVKHGFIAMKVDHMKGVILFGNLGLESDRMRDHLTVFAEFLNKARALIHPPAKKASKLGDMLSGLAETVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLKLQKITEEAEQKRLASEYEQRKTQRILREIEERELEEAQALLQEAEKRSKKKGKKPIAEGEKVTKQSLMELALSEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAFQQRLVEEKAFHEHEQQQEIEVSRQRHDGDLREKNRLVRMLDKKERVMNRRQAEYSRLRAEREERISQIIQSRKQEREAKRKMLFYLRSEEERMKKAREEEEARKREEAERRRKEEAERRAKLDEIAEKQRQRERELEEKEKLRREALLGRPTEVPPKPSEPPTGGRPLEPGSAAPAAAAAAAAPASGKYVPKFRRERGESAVQAPPPEPDRWGSRGAPNPESDRWGSRQDDRPPQPSDRWRRDDRGSSFGSGGGSRSSTWSSSPRR* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0155 973 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 526 IPR000717 -
Vvi14g0155 973 MobiDBLite consensus disorder prediction 931 953 - -
Vvi14g0155 973 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Vvi14g0155 973 MobiDBLite consensus disorder prediction 792 857 - -
Vvi14g0155 973 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Vvi14g0155 973 Gene3D UVR domain 217 267 - -
Vvi14g0155 973 Gene3D - 367 492 - -
Vvi14g0155 973 Gene3D - 268 342 - -
Vvi14g0155 973 MobiDBLite consensus disorder prediction 957 973 - -
Vvi14g0155 973 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Vvi14g0155 973 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 969 IPR027512 GO:0005852
Vvi14g0155 973 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Vvi14g0155 973 Coils Coil 747 767 - -
Vvi14g0155 973 MobiDBLite consensus disorder prediction 718 741 - -
Vvi14g0155 973 Coils Coil 561 602 - -
Vvi14g0155 973 Coils Coil 793 852 - -
Vvi14g0155 973 Pfam PCI domain 373 509 IPR000717 -
Vvi14g0155 973 MobiDBLite consensus disorder prediction 792 973 - -
Vvi14g0155 973 Coils Coil 667 697 - -
Vvi14g0155 973 Coils Coil 93 120 - -
Vvi14g0155 973 Coils Coil 622 649 - -
Vvi14g0155 973 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 960 IPR027512 GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0155 1 972 Eukaryotic Initiation Factors Gene Family AT4G11420 74.464 0.0 1360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0155 K03254 - vvi:100244162 1600.1