Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0152 ATGAGTGAGACTGAAGTTTCGAGGATGAAGTCTTCTCTGGTTCCGCTGGCAACCTTGATTGGTCGCGAGCTTAGGAACGAGAAGGTCGAGAAACCTTATATTAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGGGAGGATTATTTTCTGATCAAAACCGATTGCCAGAGGGTTCCTGGGAATCCGTCGACTTCGTTTTCAGTCTTTGCGATTTTTGATGGGCATAATGGTATATCTGCTGCTATCTTTGCAAAGGAGAATTTATTGAATAATGTTTTGAGTGCAATTCCTCAAGGCATTGGTCGGGAAGGTTGGCTTCAAGCCCTTCCTCGGGCTCTGGTTGCCGGATTTGTGAAAACTGATATAGAATTTCAGCAGAAAGGTGAAACTTCTGGCACGACAGTGACATTTGTTGTGATTGACGGGTGGACGGTGACTGTTGCATCTGTAGGGGATTCTCGATGCATATTGGACACACAGGGTGGTGTGGTTTCTTTGTTAACAGTTGATCACAGGCTGGAAGAGAATGCAGAAGAAAGGGAACGTGTCACTGCAAGTGGGGGTGAAGTTGGAAGGCTGAATGTTTTTGGGGGCAATGAGGTTGGCCCACTCCGCTGCTGGCCTGGTGGATTATGTCTCTCCAGGTCAATTGGTGACACAGATGTGGGAGAATTCATTGTCCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGGGGACGGCTTATTATTGCTTCTGATGGAATCTGGGATGCTTTATCATCTGACATGGCTGCTAAGTCTTGTCGGGGTTTGCCTGCAGAGCTTGCTGCAAAGCTGGTTGTTAAGGAAGCTTTAAGGTCAAGGGGCTTGAAGGATGATACAACATGCCTAGTTGTTGATATGATTCCATCAGATAATCCTGTCTTACCTCCAACACCAAAGAAGAAACAAAACATGCTCAGTTCATTTATCTTTGGGAAGAGATCTCAGAATTTTATGAACAAATCAACAAATAAGCTTTCTGCAGTCGGGGTTGTGGAGGAGTTGTTTGAAGAGGGTTCTGCAATGCTTGCGGAAAGGTTGGGTAAAGATATTCCTTCAAACACCAACTCTGGGCTTTTCAGATGTGCAGTCTGCCAAGTGGATCAAGATCAGTCACCAAGCGATGGTTTATCAGTGAACTCTGGACCGTTCTTCTCACCTGCATCCAAGCCATGGGAAGGTCCCTTCCTCTGTGCAAACTGTCGGAAAAAGAAAGACGCCATGGAAGGAAAAAGGCCAAGCAGACCTACAATCACCGCATAA 1293 0.4578 MSETEVSRMKSSLVPLATLIGRELRNEKVEKPYIKYGQAALAKKGEDYFLIKTDCQRVPGNPSTSFSVFAIFDGHNGISAAIFAKENLLNNVLSAIPQGIGREGWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDMIPSDNPVLPPTPKKKQNMLSSFIFGKRSQNFMNKSTNKLSAVGVVEELFEEGSAMLAERLGKDIPSNTNSGLFRCAVCQVDQDQSPSDGLSVNSGPFFSPASKPWEGPFLCANCRKKKDAMEGKRPSRPTITA* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0152 430 SMART PP2C_4 23 295 IPR001932 -
Vvi14g0152 430 FunFam probable protein phosphatase 2C 5 35 302 - -
Vvi14g0152 430 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Vvi14g0152 430 Pfam Protein phosphatase 2C 61 280 IPR001932 -
Vvi14g0152 430 CDD PP2Cc 43 296 IPR001932 -
Vvi14g0152 430 SUPERFAMILY PP2C-like 43 296 IPR036457 -
Vvi14g0152 430 PANTHER PROTEIN PHOSPHATASE 37 296 IPR015655 GO:0004722|GO:0006470
Vvi14g0152 430 Gene3D - 38 302 IPR036457 -
Vvi14g0152 430 SMART PP2C_SIG_2 51 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0152 Vvi-Chr14 1282304 1289217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0152 1 429 PP2C-type Phosphatase Gene Family AT1G09160 79.021 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0152 - - vvi:100249319 858.596