Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0141 ATGGAGAGTTTGGCATCTCTCAAAAGGTGTTTTGGCCAGGAGCAGGATGGTGATGATGATTTTGGAGTTGCAGGTCAGGGGGAGAAGATGAAGAGGTTTAAATTCGCAAGTGCTGTTAGAGACGTGATGAGTGAACGTTTGCTGAAGGAGATGGCTCTAAGGATGGAACCTTTTTTCCGAGTGCTGGTGAGGGAGGAGGTGGAACGAGCAAGTCGGCTCTTTCTGAACGCATCTCCTGGACCTTCAAGTAATCAGATTGAGTCATCTGGAGTGAGGAACTGGCAGTTGCATTTTGCCAGTAAATTGCCCTCTAAAATTTTTACGGGCAGCAGGGTAGAAGCCGAAGGCAGTACATCTGTTAAAATAGTCATACTTGATGCTCGTTCTAAGGATATAATCACATCAGGTCCCCTATCTTCAGTTAAAATTGAGATTCTTGTCCTCGACGGTGATTTTGGTACTACCGATGATAATGAAGATTGGACTGAGAGTGAGTTCAATACCAATATTGTACGTGAAAGGGAAGGCAAAAGGCCATTAGTGACTGGGGAGCTGTTTGTTACACTGAGATGTGGGGTTGGTTATATTGATGATGTCTCTTTTACTGACAATTCAAGCTGGATTAGAAGCCGGAAGTTCAGGTTAGGAGCTAGAGCTGTGTCAGGCATTTCCAAAGAAGTAAGGATTAGAGAAGCACGAAGTGAAGCTTTTGTGGTGAAAGATCATCGTGGGGAGCTGTATAAGAAGCACCACCCCCCATCATTGGATGATAAAGTGTGGCGTTTGGAAAGGATTGCAAAAGATGGTGCCTCCCACAAGCGATTGGATTCTCATGGGATTCACAATGTGAAGGACTTCTTGCGGTTGTACGTAACTGATCAATCCTCACTACGCAAGCTGCTTGGCAATGGGATTTCAAACAAGATATGGGAGATAATCATAGAACATGCTAATACCTATGTTGGAGATGAGGAGTTGTATGTGTACTCCAGGGCTGGGGAAAGTCTTGGGGTCGTGCTCAGTTCAATCTATAAGATTGTTGGGTTAACATTTGATAGTCATAGTTATCAGGCTGTGGATAAACTCACTATGCAGGAAAAGTTTTTGATGGAAGATTTGAAACGGCATGCCTATAAAAATGTGAATGACATTAAACCCTTCCCAACAAGGCCTTTGCCAACCATACAAACTGAAACATTCAACGATCCATGTCTACCCCTGCACAATTTCCCAGTCAGACATCAAGATCAATCTGATTCACAGATGGGATTTGACCAGTCACCATCTTCATCATACTATGACTGGGATGACAACAATCAAGAAGTAGTTTCTCTAGCTGCATGTCATCCACTGGAAGCATTGAGTCCAATGTTAAGGAGCAGTTTCATACTGAGGGACACTTACACAGGACCCTTCAATGGGGGTATTGGTTGGTCTTCAAGCGGGTCACCGGGGCCAGTTATGCCAAATGGTCATTTGGCTGCAGACGACACTTTCCAGTTTCAAACATCAACTTTATTTCCTGTTTCTGCCACATGGGGGCAAGGGAATAGTTTTTTCCTTGCTGCAAACAATGAAGCAGAGGTTGGCATTCTTTCCTCTCACCCCAATTTTGGCATCGGTATGTCAAGGAAAGGAAAACCTAGAGCAAGGTGGTGCAAGATTCGGGCTGCTCTTAAGTGGGGGATATCGGTTAGGCGAGATGTGGAAGCTAAGAGGATGATGCAAAAGCTTATTTTCTGCTCAACCCCGATTTGGGATTAA 1764 0.4433 MESLASLKRCFGQEQDGDDDFGVAGQGEKMKRFKFASAVRDVMSERLLKEMALRMEPFFRVLVREEVERASRLFLNASPGPSSNQIESSGVRNWQLHFASKLPSKIFTGSRVEAEGSTSVKIVILDARSKDIITSGPLSSVKIEILVLDGDFGTTDDNEDWTESEFNTNIVREREGKRPLVTGELFVTLRCGVGYIDDVSFTDNSSWIRSRKFRLGARAVSGISKEVRIREARSEAFVVKDHRGELYKKHHPPSLDDKVWRLERIAKDGASHKRLDSHGIHNVKDFLRLYVTDQSSLRKLLGNGISNKIWEIIIEHANTYVGDEELYVYSRAGESLGVVLSSIYKIVGLTFDSHSYQAVDKLTMQEKFLMEDLKRHAYKNVNDIKPFPTRPLPTIQTETFNDPCLPLHNFPVRHQDQSDSQMGFDQSPSSSYYDWDDNNQEVVSLAACHPLEALSPMLRSSFILRDTYTGPFNGGIGWSSSGSPGPVMPNGHLAADDTFQFQTSTLFPVSATWGQGNSFFLAANNEAEVGILSSHPNFGIGMSRKGKPRARWCKIRAALKWGISVRRDVEAKRMMQKLIFCSTPIWD* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0141 587 Pfam Calmodulin binding protein-like N-terminal domain 94 242 IPR046831 -
Vvi14g0141 587 Pfam Calmodulin binding protein C-terminal domain 325 386 IPR046829 -
Vvi14g0141 587 Pfam Calmodulin binding protein central domain 254 319 IPR046830 -
Vvi14g0141 587 PANTHER OS02G0177800 PROTEIN 31 429 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0141 Vvi-Chr14 1159087 1163913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0141 16 462 Calmodulin-binding Proteins AT5G57580 42.826 4.97e-113 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0141 - - vvi:104881366 1155.58