Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0131 ATGGCTCAATCATCCAATAATGCTGTTGGAGTTGATAACACTTTTAGGAGGAAATTTGATAAAGAAGAGTACTTAGAACGAGCTAGGAAGCGTGAACAGGAGGAGGAGGAGGGGGGGAGGCATAAATCCAAGTCCAAAGGTCCTCCGGTGCAAAGGAAACCCTTGAAGCACAGAGATTATGAAGTAGACCTTGAATCCCGTTTGGGAAAAACCCAGGTTGTTACTCCAATAGCACCTCTCAGCCAGCAGGCTGGATACTACTGTTCAGTTTGTGAATGTGTAGTAAAGGATTCTGCAAACTACTTGGACCATATCAATGGAAAGAAACATCAAAGAGCTTTGGGAATGTCTATGCGAGTAGAACGGGCTTCTCTTCAACAGGTCCAGGAGCGATTTGAAGTTCTCAAGAAGCGGCGAACACCTGGTAGCTTTACCGAGCAAGATCTTGATGAGCGGATCTTAAAACAGCAGCAAGAAGAGGAGGAACGGAAACGTCAGCGTCGAGAGAGAAAGAAAGAGAAAAAGAAAGAGAAGGCAGTAGAAGAGGAACCCGAGCTAGACCCTGATGTTGCAGCCATGATGGGATTTGGGGGGTTCCGATCATCCAAGAAGTGA 615 0.4618 MAQSSNNAVGVDNTFRRKFDKEEYLERARKREQEEEEGGRHKSKSKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQERFEVLKKRRTPGSFTEQDLDERILKQQQEEEERKRQRRERKKEKKKEKAVEEEPELDPDVAAMMGFGGFRSSKK* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0131 204 Gene3D Classic Zinc Finger 81 118 - -
Vvi14g0131 204 FunFam zinc finger matrin-type protein 2-like 80 118 - -
Vvi14g0131 204 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 10 204 IPR040107 GO:0000398|GO:0005681
Vvi14g0131 204 MobiDBLite consensus disorder prediction 22 44 - -
Vvi14g0131 204 MobiDBLite consensus disorder prediction 143 167 - -
Vvi14g0131 204 SUPERFAMILY beta-beta-alpha zinc fingers 82 123 IPR036236 -
Vvi14g0131 204 MobiDBLite consensus disorder prediction 143 204 - -
Vvi14g0131 204 SMART ZnF_U1_5 83 117 IPR003604 GO:0003676|GO:0008270
Vvi14g0131 204 Pfam Zinc-finger of C2H2 type 86 110 - -
Vvi14g0131 204 Coils Coil 151 183 - -
Vvi14g0131 204 MobiDBLite consensus disorder prediction 22 58 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0131 4 148 C2H2 Transcription Factor Family AT3G05760 80.690 5.35e-86 249