Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0117 ATGGGTGGCCCAAGGCAAACTATTAGCTCTGCATCTGAAGAAGATCCTCAGTATGCGATGATGGATGAGAAGAAAAGGAGAAGGATGCTGTCGAATCGGGAATCGGCCAGGCGATCTAGAATGAAGAAGCAGAAGCTTTCAGAGGATTTGATCAGTGAAGTGAGCAGACTGCAGAATTTGAACAAGGAGATAAAGCAAACAATTGATGCCACTACTCAAGGATATCAAAACTTTGTGTCTGAGAATAATGTTTTGGTGGCTCAAAAGATGGAGCTGGTGGATCGGCTGAATTCTCTGAATTTTATACTTCAAAATGTGCAAGATGTTTATGGTGTGCCCCTGGACATTCCTGAGATCCCAGATCCTTTGCTGAAACCATGGAGCCTTCCTTGCCCATTGCAACTTATCCCAGCTTCTTCAGACATGTTGCAGTTCTGA 438 0.4406 MGGPRQTISSASEEDPQYAMMDEKKRRRMLSNRESARRSRMKKQKLSEDLISEVSRLQNLNKEIKQTIDATTQGYQNFVSENNVLVAQKMELVDRLNSLNFILQNVQDVYGVPLDIPEIPDPLLKPWSLPCPLQLIPASSDMLQF* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0117 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 85 IPR004827 GO:0003700|GO:0006355
Vvi14g0117 145 CDD bZIP_plant_GBF1 25 73 IPR045314 GO:0003700|GO:0006355
Vvi14g0117 145 Coils Coil 43 67 - -
Vvi14g0117 145 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Vvi14g0117 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Vvi14g0117 145 Pfam bZIP transcription factor 24 82 IPR004827 GO:0003700|GO:0006355
Vvi14g0117 145 FunFam BZIP transcription factor 22 73 - -
Vvi14g0117 145 SUPERFAMILY Leucine zipper domain 24 78 IPR046347 GO:0003700|GO:0006355
Vvi14g0117 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 106 - -
Vvi14g0117 145 MobiDBLite consensus disorder prediction 1 45 - -
Vvi14g0117 145 MobiDBLite consensus disorder prediction 17 45 - -
Vvi14g0117 145 Gene3D - 22 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0117 Vvi-Chr14 959856 960293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0117 1 143 bZIP Transcription Factor Family AT3G62420 52.083 1.93e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi14g0117 bZIP_1 2.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0117 K25786 - vvi:100244279 276.944