Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0115 ATGGGCTGTCAGGATGAGCTTTTGGTAGAAAAGGTCTGTGAGATGTATGAGAAAATCTCGAGGCTTGAGAGTCTGAAACCATCCAAAGATGTCAACATGCTGTTCACCCAACTAGTCCGCACGTGCATGCCACCGAGCCCCATTGATGTAACCAAGCTGTGCAAAAGGGTGCAAGAAATGCGGTCTAAGCTCATTAGGCTCTGTGGGGAAGCTGAAGGGCTCTTGGAGGGTCATTTCTCTACCATCTTAGGATCATATGAGAACCCCCTTGACCATCTCAATCTTTTTCCTTACTATTCAAACTACCTTAAGCTCAGCCTCCTTGAGTTCACCCTTCTTAGTCAAAACTGCACCCATGTCCCTAGCAAAATCGCCTTTGTGGGCTCAGGGCCCCTGCCCCTCACTTCGATCGTCTTGGCCTCATATCACCTCACTACAACCTCCTTCCACAACTATGACATTGACCCAGCGGCCAATTCAATGGCTGCTCACTTAGTTTCATCCGATCCTGACTTCTCCAAGCGTATGCTCTTCCATACTACTGATATAATGAATGTGACAAATGAGTTGAAAGAGTATGATGTCGTTTACTTGGCAGCTTTGGTTGGTATGGACAAGGAGGAGAAGATCCAGGTGATGGATCATTTGGCTAAGCACATGGCTCCAGGAGCGCTTTTGATGCTGAGGAGTGCTCATGGTGCTCGGGCTTTTCTCTATCCAGTCATTGATCCTTGTGATCTTCGAGGATTTGAGGTTCTTTCCATCTTCCATCCAACAGATGAGGTCATAAATTCAGTTGTTGTCGCGCGTAAATTTCCAATGCATGTACACTCACTTGATCAAGGGCTTGGCCCCATGATACTGCCTAGCAAATGTTCTGAGATCCAAGTCTTCAATCCCCTTGAGGAATTGACGATCGAGGATTCAAGTGTTCTTCAGATTTTTTTCTCTAGTTTTTCTTTGTATCATTGA 972 0.4599 MGCQDELLVEKVCEMYEKISRLESLKPSKDVNMLFTQLVRTCMPPSPIDVTKLCKRVQEMRSKLIRLCGEAEGLLEGHFSTILGSYENPLDHLNLFPYYSNYLKLSLLEFTLLSQNCTHVPSKIAFVGSGPLPLTSIVLASYHLTTTSFHNYDIDPAANSMAAHLVSSDPDFSKRMLFHTTDIMNVTNELKEYDVVYLAALVGMDKEEKIQVMDHLAKHMAPGALLMLRSAHGARAFLYPVIDPCDLRGFEVLSIFHPTDEVINSVVVARKFPMHVHSLDQGLGPMILPSKCSEIQVFNPLEELTIEDSSVLQIFFSSFSLYH* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0115 323 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 235 IPR029063 -
Vvi14g0115 323 Gene3D Vaccinia Virus protein VP39 5 273 IPR029063 -
Vvi14g0115 323 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Vvi14g0115 323 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Vvi14g0115 323 PANTHER NICOTIANAMINE SYNTHASE 3 4 288 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0115 Vvi-Chr14 941773 942914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0115 1 294 Nicotianamine Synthase Gene Family AT1G09240 67.667 1.36e-147 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0115 K05953 - vvi:100254544 613.994