Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0098 ATGTTTTTGTGTGTAGAGACTACAAGGAGCTATTCTATGGAGAAATCGTATATGGTGACAGATTCTGAAGGTGGTTATAGATCGATGGAATCCAATAGGAGGAAACGGAAAAAAATGGAGTCGGGGAGTCAGAAGGTGAAGAGGGGAGGGAGGTGGAGGACGGAGGCGGAGCAGCAGATCTACTCAGCGAAACTCGTCGAGGCTATCACCAAAGTGCGCCGTAGCTCTGCTCCTGCGGCGGCTGTACATCGCGGCCGTGCGGTGAGGGAAGCGGCTGACCGTGTTCTGGCTGCGGCGGGGAAAGGAAGGACGCGGTGGAGTCGAGCGATTATGACGAGTCGAGTCGGGTTGAGGCTGAGGAAGAGGAGGAAGGTGACGGTGACAGGTAATAACCGGTTGAGGAAGCCGGCGGTGAGCAAGCAGGAACCCCCGCTGAAGCGGCGAGTGCGCGTCCTCGGCCGGTTAGTTCCTGGTTGCCGGAAACTTTCGTTCCCGAATCTTTTAGAAGAAGCGACTGACTATATAGCGGCTTTGGAGATGCAAGTTCGAGCCATGACTGCGCTAGCCGAGCTTCTCGCTGGCACCGGCGCCTCGAGCTCGAATTTGCAGCCGCCGAGCTGCTAA 624 0.5657 MFLCVETTRSYSMEKSYMVTDSEGGYRSMESNRRKRKKMESGSQKVKRGGRWRTEAEQQIYSAKLVEAITKVRRSSAPAAAVHRGRAVREAADRVLAAAGKGRTRWSRAIMTSRVGLRLRKRRKVTVTGNNRLRKPAVSKQEPPLKRRVRVLGRLVPGCRKLSFPNLLEEATDYIAALEMQVRAMTALAELLAGTGASSSNLQPPSC* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0098 207 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 54 192 IPR044660 GO:0006355
Vvi14g0098 207 MobiDBLite consensus disorder prediction 22 51 - -
Vvi14g0098 207 MobiDBLite consensus disorder prediction 27 51 - -
Vvi14g0098 207 CDD bHLH_AtIBH1_like 142 189 IPR044549 GO:0006355
Vvi14g0098 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 193 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0098 Vvi-Chr14 763399 764126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0098 50 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 46.023 2.51e-41 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0098 - - vvi:100252798 369.007