Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g0090 | ATGTCGCTGCGGCCCGGTTCTCGCACAGATGTGCGCAAGAAATCCTATAAGACCGGCGTGGACGCTGAGGAGGCTCGCCGGAGAAGAGAGGACAATCTGGTGGAGATCAGGAAGAACAAGCGCGAGGACAATCTCCTTAAAAAGAGGAGGGAGGGGCTTATTCTTCAGTCCCAGCAGTTCTCTTCTGATGCCTCTCAAACCACTGCCGTAGTTGAAAAAAGGTTGGAAAGTATTACTTTGATGGTTCAAGGAGTATGGTCTGATGATCCTGCTTCACAACTGGAAGCAACCACTCAATTCAGAAAGCTACTATCTATTGAGCGCAGCCCTCCAATTGATGAGGTGATCAAAGCAGGTGTTGTTCCCCGATTTGTGGAGTTCCTTGGAAGGCATGATTTGCCCCAGTTGCAATTTGAGGCGGCATGGGCATTGACTAATGTTGCTTCTGGGACATCGGAACATACTCGAGTTGTCATTGAACATGGTGCTGTCCCCATGTTTGTGCAACTTCTTAGCTCTGCCAGCGATGACGTGCGAGAGCAGGCAGTATGGGCTTTGGGTAATGTTGCTGGTGATTCTCCAAGTTGTAGGGATCTTGTTCTTGGTCATGGTGCCCTTATGCCATTATTATCTCAGTTAAATGAACACTCAAAGCTATCTATGTTGAGGAATGCTACATGGACTTTATCTAACTTCTGTCGTGGCAAGCCACCAACACCATTTGAACAGGTGAAGCCTGCATTACCAGTTCTTCGGCAACTCATCCACTTAAATGATGAAGAAGTTCTAACAGATGCTTGCTGGGCTCTATCCTATCTTTCTGATGGCCCCAATGATAAAATTCAGGCCGTGCTTGAAGCAGGTGTTTGTCCACGACTTGTCGAGCTTCTATTGCATCCATCTCCAACTGTTCTTATACCTGCTCTTCGAACAGTGGGAAACATTGTTACGGGTGATGATGCTCAGACTCAGTTTGTAATTGACAACCAAGTGCTCCCTTGTCTCTATCAACTTCTTACGCAAAATCACAAAAAAAGCATCAAGAAAGAAGCTTGTTGGACAATCTCAAATATCACTGCTGGGAACAAAGGTCAAATACAGGCTGTTATTGAGGCTAATATCATCCTCCCTCTTGTAAACCTACTTCAACATGCGGAGTTTGACATCAAAAAGGAGGCTGCTTGGGGTATCTCAAATGCCACGTCTGGAGGCTCTCATGAGCAGATTCAGTTTTTAGTGAGCCAAGGTTGCATAAAGCCCCTGTGCGATCTTCTAATGTGTCCAGACCCAAGGATTGTGACAGTATGCCTCGAGGGCCTTGAGAACATTCTGAAGGTGGGTGAGGCTGACAAAGAATCGGGAAAGAATGGTGGAATCAATCTTTACGCACAAATGATTGATGAGTGTGATGGCTTGGATAAGATTGAGCTGCTGCAGACCCACGACAACAATGAGATATATGAGAAGTCTGTAAAGCTTTTGGAGAGATACTGGGCAGAGGAAGACGAGGAAGTCCAGAATGTCCAGGATGGGGATGGAAATCAACAGGGATTCGGTTTTGGAAGTAGCCAGCCCAACCTTCCTCCAGGTGGCTTTAAATTTGGTTGA | 1608 | 0.4633 | MSLRPGSRTDVRKKSYKTGVDAEEARRRREDNLVEIRKNKREDNLLKKRREGLILQSQQFSSDASQTTAVVEKRLESITLMVQGVWSDDPASQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDLPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPMFVQLLSSASDDVREQAVWALGNVAGDSPSCRDLVLGHGALMPLLSQLNEHSKLSMLRNATWTLSNFCRGKPPTPFEQVKPALPVLRQLIHLNDEEVLTDACWALSYLSDGPNDKIQAVLEAGVCPRLVELLLHPSPTVLIPALRTVGNIVTGDDAQTQFVIDNQVLPCLYQLLTQNHKKSIKKEACWTISNITAGNKGQIQAVIEANIILPLVNLLQHAEFDIKKEAAWGISNATSGGSHEQIQFLVSQGCIKPLCDLLMCPDPRIVTVCLEGLENILKVGEADKESGKNGGINLYAQMIDECDGLDKIELLQTHDNNEIYEKSVKLLERYWAEEDEEVQNVQDGDGNQQGFGFGSSQPNLPPGGFKFG* | 536 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g0090 | 535 | PIRSF | Importin_alpha | 2 | 534 | IPR024931 | GO:0005737|GO:0006606|GO:0061608 | |
Vvi14g0090 | 535 | SUPERFAMILY | ARM repeat | 13 | 502 | IPR016024 | - | |
Vvi14g0090 | 535 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 119 | 162 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 162 | 204 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Vvi14g0090 | 535 | FunFam | Importin subunit alpha | 11 | 50 | - | - | |
Vvi14g0090 | 535 | MobiDBLite | consensus disorder prediction | 7 | 29 | - | - | |
Vvi14g0090 | 535 | Pfam | Atypical Arm repeat | 460 | 508 | IPR032413 | - | |
Vvi14g0090 | 535 | Gene3D | - | 76 | 499 | IPR011989 | - | |
Vvi14g0090 | 535 | FunFam | Importin subunit alpha | 76 | 499 | - | - | |
Vvi14g0090 | 535 | SMART | arm_5 | 108 | 149 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | SMART | arm_5 | 236 | 275 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | SMART | arm_5 | 193 | 234 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | SMART | arm_5 | 319 | 360 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | SMART | arm_5 | 405 | 445 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | SMART | arm_5 | 362 | 402 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | SMART | arm_5 | 277 | 317 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | SMART | arm_5 | 151 | 191 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | PANTHER | IMPORTIN ALPHA | 12 | 503 | - | - | |
Vvi14g0090 | 535 | Pfam | Importin beta binding domain | 12 | 98 | IPR002652 | GO:0006606|GO:0061608 | |
Vvi14g0090 | 535 | MobiDBLite | consensus disorder prediction | 509 | 523 | - | - | |
Vvi14g0090 | 535 | Pfam | Armadillo/beta-catenin-like repeat | 193 | 234 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | Pfam | Armadillo/beta-catenin-like repeat | 362 | 401 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | Pfam | Armadillo/beta-catenin-like repeat | 109 | 149 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | Pfam | Armadillo/beta-catenin-like repeat | 278 | 316 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | Pfam | Armadillo/beta-catenin-like repeat | 247 | 274 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | Pfam | Armadillo/beta-catenin-like repeat | 319 | 360 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | Pfam | Armadillo/beta-catenin-like repeat | 152 | 190 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | Pfam | Armadillo/beta-catenin-like repeat | 406 | 443 | IPR000225 | GO:0005515 | |
Vvi14g0090 | 535 | MobiDBLite | consensus disorder prediction | 509 | 535 | - | - | |
Vvi14g0090 | 535 | Gene3D | - | 11 | 50 | IPR036975 | GO:0006606 | |
Vvi14g0090 | 535 | ProSiteProfiles | IBB domain profile. | 1 | 58 | IPR002652 | GO:0006606|GO:0061608 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi14g0090 | Vvi-Chr14 | 714517 | 726771 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi14g0090 | 134 | 394 | U-box Gene Family | AT3G46510 | 22.222 | 4.28e-06 | 47.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g0090 | K15042 | - | vvi:100263083 | 1036.17 |