Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0089 ATGGCGGATAACGACGGACCGGATCAATACGGTGTCGTTTTATACTACAAGTACACTCCTATTCCTGACGTCGACCAACTCTTCTCCTTCTACGATTCTAACTGCAACTCACTCGGCCTTCTCGGCCGAGTCCGACTCGCTCCCGATGGCGTCAACGTCACCATTGGTGGGAAGCTATCTTTATTGGAGAAACACATTGCTGCAGTGAAGTCAAATAGCTTATTCGAAGGGACCGACTTCAAGCTTGCGTCTTGCCACCACCCACTAAATGACCAAGTTGCAAAAGAATGTGGATTCACTTCTCTCTCAATTCGAGTTGTCAAGGAATTGGTTACCTTTAGCCCTCATCCTTTGTTGAAATCGCCAGAAATTTCAAATGCCGGAACGCATCTTTCTGCGGTTGAGTTCCATTCTGTTCTTCAAAGTGCTGGACCACTGTTGGAGAAAGAGAATCCAAGTAACCATAAAAAACTTGTTCTGTTGGATGCAAGGAATTTGTATGAGACAAGAATTGGCAAGTTTAAAACTCCAAATGTGGAAACTTTGGATCCAGGAATCAGGCAGTATAGTGATTTGCCCTCCTGGATAGATGATAACTCTGAGCGATTCCGTGGGAATCGTGTCCTCATGTATTGTACCGGAGGAATAAGGTGTGAGATGGCGTCAGCCTATATTAGGTCAAAAGGAGCTGGCTTTGAAAATGTATTTCAGTTATTTGGTGGAATTCAACGTTATTTGGAACAATTTCCAGATGGAGGTTTCTTCAAAGGAAAGAATTTTGTTTTTGATCACCGAATTTCAGTTGGCAGCTCAGATGCAAATATTATGGGTGCCTGTCTTCTCTGTGGCTCGTCATTTGATGATTACTCTTCACGCTGCCGATGCAACCACTGTCGGATGCTTGTTTTAGTTTGTGATAGTTGTCAGAAGAAGGATGCTTTATATGTCTGTGAGCTATGCCAGAAACATGGTAAGGGTTACGGGTCAATTCCATTGATTGAAAATGATGAGTCACAAGTAATAACTCAACCCATCAAGCTCAAAACTGTTCCCTCTGATGATACCACACTCTCACCTCAAATCCATTCGAGACATGGTTCCAAGCCTTCCAGAAAACTCAGAATCTTGTGCTTGCACGGGTTTCGGCAGAATGCCTCTGGTTTTAAAGGAAGAACTGCATCATTAGTGAAGAAACTCAAAAGCATTGCTGAGCTTGTTTTTGTCGATGCACCCCATGAGTTGCCTTTCATCTACCAACCTTGTTTACAAGAGCCAAATTCCAAAGATTTGTCATCTTTATCACAACAAAGCCCACCCCCAGCTAATTGCAGGAAAAAGTTTGCGTGGTTAGTGTCACCTGATTTCAGCGGAGCAAGTGAATCCAATTGGAAAAAGGCAGACGGTCAGTTCGATCCTCTCCAGTACCAGCAGCAAACGGATGGGTTTGATGTATCACTAGCTTATTTGAAGACGGTATTTTCTCAGGCAGGACCATTTGATGGGATAATGGGATTTTCTCAAGGAGCAGCAATGGCTGCTGCAGTCTCTGCAAGAAGAGGAAGACCAGGTGGTGAAATGGATTTCAGATTTGTGATTTTGTGCTCTGGGTTTGCTCTTAACTTACCAGATTCGGTAGGGGGTTCGATCAACTGCCCTTCGCTCCATATTTTCGGGAATGAGCAGGGGAATGACAGGCAGATAGCCAACCAAGCCAGCAGGGACCTTGCTGCATCATTCGAAGAGGGCTGCTCTGTGATCATTGAACACGACTCTGGCCACATGATTCCAACTCGGTCTCCTTACATTGATGAAATCAGAGATTTTCTTCATCGGTTTCTCTGA 1842 0.4435 MADNDGPDQYGVVLYYKYTPIPDVDQLFSFYDSNCNSLGLLGRVRLAPDGVNVTIGGKLSLLEKHIAAVKSNSLFEGTDFKLASCHHPLNDQVAKECGFTSLSIRVVKELVTFSPHPLLKSPEISNAGTHLSAVEFHSVLQSAGPLLEKENPSNHKKLVLLDARNLYETRIGKFKTPNVETLDPGIRQYSDLPSWIDDNSERFRGNRVLMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANIMGACLLCGSSFDDYSSRCRCNHCRMLVLVCDSCQKKDALYVCELCQKHGKGYGSIPLIENDESQVITQPIKLKTVPSDDTTLSPQIHSRHGSKPSRKLRILCLHGFRQNASGFKGRTASLVKKLKSIAELVFVDAPHELPFIYQPCLQEPNSKDLSSLSQQSPPPANCRKKFAWLVSPDFSGASESNWKKADGQFDPLQYQQQTDGFDVSLAYLKTVFSQAGPFDGIMGFSQGAAMAAAVSARRGRPGGEMDFRFVILCSGFALNLPDSVGGSINCPSLHIFGNEQGNDRQIANQASRDLAASFEEGCSVIIEHDSGHMIPTRSPYIDEIRDFLHRFL* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0089 613 Gene3D - 120 279 IPR036873 -
Vvi14g0089 613 ProSiteProfiles Rhodanese domain profile. 154 254 IPR001763 -
Vvi14g0089 613 SMART rhod_4 143 251 IPR001763 -
Vvi14g0089 613 FunFam Rhodanese-like domain-containing protein 6 2 111 - -
Vvi14g0089 613 Gene3D - 2 111 - -
Vvi14g0089 613 FunFam esterase OVCA2 isoform X6 369 613 - -
Vvi14g0089 613 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 118 282 - -
Vvi14g0089 613 Pfam UPF0176 acylphosphatase like domain 10 109 IPR040503 -
Vvi14g0089 613 Pfam Serine hydrolase (FSH1) 371 604 IPR005645 -
Vvi14g0089 613 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 6 612 IPR020936 -
Vvi14g0089 613 Gene3D alpha/beta hydrolase 369 613 IPR029058 -
Vvi14g0089 613 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 119 268 IPR036873 -
Vvi14g0089 613 SUPERFAMILY alpha/beta-Hydrolases 345 613 IPR029058 -
Vvi14g0089 613 Pfam Rhodanase C-terminal 256 321 IPR022111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0089 Vvi-Chr14 708913 713525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0089 8 613 Sulfurtransferasese or Rhodanese AT1G09280 66.721 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0089 - - vvi:100261383 1243.02