Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi14g0086 | ATGGATTATTTCAAGAAGGGAGCGGAGATTGAGATTAGCAGCGACGAAGATGGCTTCCGAGGCGCCTGGTTTGCCGGAACGGTGGTCAAACCGCCGGCAAAGAAGAAAAACAAAACCCTAGTGGTTGTCGAGTACAAAACCATAATGGCTGACGAATCTGGAGCGAATCCGCTGAGAGAGACCATGGATGTGTTGCAGTTGAGGCCCCCGCCGCCTCGAGAGCGCTCTAGAACCTTCCAGATCAGCGAGGAGGTCGACGCGTATTACAATGATGGGTGGTGGGAGGGTGTGATCACCGAAGCTCATGAAAATTCGCGGTTCGCAGTGTTCTTCAGGACTTCCCGGGAGCAGTTGGAGTTTTCTGAGAACGACTTGAGGCTTCATCGCGAATGGATTAATGGGAACTGGGTTCCGCCATTGGAAGAAGAGAAAGTTAAAACAGAAGAGAAGTCAGCAGTTGATGTTAGCAGTGTGTTTAGTGAAGGGACACTGGTTGAGGTCAGCAGTGATGAAGATGGTTTTCAGGGCGCCTGGTTTGCTGCAACTATTGTTAAAGTAATAGGGAAGGACAAACTCATGATTGAGTACAAAAGCCTAAGGACAGATGATGATACTGATTTTTTGAGAGAAGAGGTTGATGCTTTGCACATTAGGCCTTATCCTCCAGAAACTGTAGTGGTTGACCGTTTCAATCTGCTTGAAGAGGTCGATGCTTTGTACAATGATGGATGGTGGGTGGGCGTGATTTCCAAAGTTCTTAGTCGATCATGTTACGTAGTCTATTTCAGGAGCACCAATGAAGAAATGAAGTTTGACCACTCTGATTTAAGGCTTCATCAAGATTGGATTGATGGCAAATGGGTTAAGGCTTCCCAGGCTCTGGAGTTGTGA | 891 | 0.4736 | MDYFKKGAEIEISSDEDGFRGAWFAGTVVKPPAKKKNKTLVVVEYKTIMADESGANPLRETMDVLQLRPPPPRERSRTFQISEEVDAYYNDGWWEGVITEAHENSRFAVFFRTSREQLEFSENDLRLHREWINGNWVPPLEEEKVKTEEKSAVDVSSVFSEGTLVEVSSDEDGFQGAWFAATIVKVIGKDKLMIEYKSLRTDDDTDFLREEVDALHIRPYPPETVVVDRFNLLEEVDALYNDGWWVGVISKVLSRSCYVVYFRSTNEEMKFDHSDLRLHQDWIDGKWVKASQALEL* | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi14g0086 | 296 | CDD | Tudor_Agenet_AtDUF_rpt2_4 | 232 | 278 | - | - | |
Vvi14g0086 | 296 | Pfam | Agenet domain | 84 | 140 | IPR008395 | - | |
Vvi14g0086 | 296 | Pfam | Agenet domain | 162 | 222 | IPR008395 | - | |
Vvi14g0086 | 296 | Pfam | Agenet domain | 7 | 72 | IPR008395 | - | |
Vvi14g0086 | 296 | CDD | Tudor_Agenet_AtDUF_rpt1_3 | 4 | 67 | - | - | |
Vvi14g0086 | 296 | CDD | Tudor_Agenet_AtDUF_rpt1_3 | 159 | 222 | - | - | |
Vvi14g0086 | 296 | SMART | agenet_At_2 | 228 | 284 | IPR014002 | - | |
Vvi14g0086 | 296 | SMART | agenet_At_2 | 157 | 225 | IPR014002 | - | |
Vvi14g0086 | 296 | SMART | agenet_At_2 | 77 | 133 | IPR014002 | - | |
Vvi14g0086 | 296 | SMART | agenet_At_2 | 2 | 75 | IPR014002 | - | |
Vvi14g0086 | 296 | PANTHER | AGENET DOMAIN-CONTAINING PROTEIN-RELATED | 3 | 149 | - | - | |
Vvi14g0086 | 296 | CDD | Tudor_Agenet_AtDUF_rpt2_4 | 83 | 127 | - | - | |
Vvi14g0086 | 296 | Gene3D | - | 136 | 230 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi14g0086 | Vvi-Chr14 | 693847 | 696257 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi14g0086 | 169 | 282 | PHD Transcription Factor Family | AT5G58610 | 28.889 | 6.34e-07 | 48.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi14g0086 | - | - | vvi:100266586 | 607.446 |