Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0086 ATGGATTATTTCAAGAAGGGAGCGGAGATTGAGATTAGCAGCGACGAAGATGGCTTCCGAGGCGCCTGGTTTGCCGGAACGGTGGTCAAACCGCCGGCAAAGAAGAAAAACAAAACCCTAGTGGTTGTCGAGTACAAAACCATAATGGCTGACGAATCTGGAGCGAATCCGCTGAGAGAGACCATGGATGTGTTGCAGTTGAGGCCCCCGCCGCCTCGAGAGCGCTCTAGAACCTTCCAGATCAGCGAGGAGGTCGACGCGTATTACAATGATGGGTGGTGGGAGGGTGTGATCACCGAAGCTCATGAAAATTCGCGGTTCGCAGTGTTCTTCAGGACTTCCCGGGAGCAGTTGGAGTTTTCTGAGAACGACTTGAGGCTTCATCGCGAATGGATTAATGGGAACTGGGTTCCGCCATTGGAAGAAGAGAAAGTTAAAACAGAAGAGAAGTCAGCAGTTGATGTTAGCAGTGTGTTTAGTGAAGGGACACTGGTTGAGGTCAGCAGTGATGAAGATGGTTTTCAGGGCGCCTGGTTTGCTGCAACTATTGTTAAAGTAATAGGGAAGGACAAACTCATGATTGAGTACAAAAGCCTAAGGACAGATGATGATACTGATTTTTTGAGAGAAGAGGTTGATGCTTTGCACATTAGGCCTTATCCTCCAGAAACTGTAGTGGTTGACCGTTTCAATCTGCTTGAAGAGGTCGATGCTTTGTACAATGATGGATGGTGGGTGGGCGTGATTTCCAAAGTTCTTAGTCGATCATGTTACGTAGTCTATTTCAGGAGCACCAATGAAGAAATGAAGTTTGACCACTCTGATTTAAGGCTTCATCAAGATTGGATTGATGGCAAATGGGTTAAGGCTTCCCAGGCTCTGGAGTTGTGA 891 0.4736 MDYFKKGAEIEISSDEDGFRGAWFAGTVVKPPAKKKNKTLVVVEYKTIMADESGANPLRETMDVLQLRPPPPRERSRTFQISEEVDAYYNDGWWEGVITEAHENSRFAVFFRTSREQLEFSENDLRLHREWINGNWVPPLEEEKVKTEEKSAVDVSSVFSEGTLVEVSSDEDGFQGAWFAATIVKVIGKDKLMIEYKSLRTDDDTDFLREEVDALHIRPYPPETVVVDRFNLLEEVDALYNDGWWVGVISKVLSRSCYVVYFRSTNEEMKFDHSDLRLHQDWIDGKWVKASQALEL* 297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0086 296 CDD Tudor_Agenet_AtDUF_rpt2_4 232 278 - -
Vvi14g0086 296 Pfam Agenet domain 84 140 IPR008395 -
Vvi14g0086 296 Pfam Agenet domain 162 222 IPR008395 -
Vvi14g0086 296 Pfam Agenet domain 7 72 IPR008395 -
Vvi14g0086 296 CDD Tudor_Agenet_AtDUF_rpt1_3 4 67 - -
Vvi14g0086 296 CDD Tudor_Agenet_AtDUF_rpt1_3 159 222 - -
Vvi14g0086 296 SMART agenet_At_2 228 284 IPR014002 -
Vvi14g0086 296 SMART agenet_At_2 157 225 IPR014002 -
Vvi14g0086 296 SMART agenet_At_2 77 133 IPR014002 -
Vvi14g0086 296 SMART agenet_At_2 2 75 IPR014002 -
Vvi14g0086 296 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 3 149 - -
Vvi14g0086 296 CDD Tudor_Agenet_AtDUF_rpt2_4 83 127 - -
Vvi14g0086 296 Gene3D - 136 230 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi14g0086 Vvi-Chr14 693847 696257 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0086 169 282 PHD Transcription Factor Family AT5G58610 28.889 6.34e-07 48.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0086 - - vvi:100266586 607.446