Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0070 ATGGCAGTGAAGGACATCTCGAAGCAAACGGTGGAGATCAACAATCTGAGATTCACCTACCCAGGAATCGACGGCCAACCTCCTCCCGGATCTACGCCTCTGATCGACCACTTCTCTCTCACTCTCAACTCCGGCGACCGCTGCCTCCTCGTCGGATCCAATGGCGCAGGGAAAACTACAATTCTGAAAATCTTGGGTGGGAAGCACATGGTAGAACCTCACATGGTTCGAGTACTTGGAAGATCGGCTTTTCATGACACTGCCTTGACATCTTCTGGTGACCTCTGCTATCTTGGAGGAGAGTGGAGGCGAGACGTTGCCTTTGCTGGGTTTGAGGTTCCGATTCAAATGGATGTTTCAGCTGAGAAAATGATATTTGGAGTATCGGGTATTGATCCTCAAAGAAGAGCTGAACTAATCAAGGTTTTAGATATTGATCTATCATGGAGACTTCACAAGGTGTCTGATGGTCAGAGAAGACGGGTGCAAATCTGTATGGGTCTCCTCAAGCCATTCAAAGTTCTTCTTCTAGACGAGATAACAGTTGATCTTGATGTACTGGCCAGGGCCGACCTTCTGAAGTTCCTCAGAAAGGAATGTGAAGAGCGAGGTGCTACAATCATCTATGCGACGCATATATTTGATGGTCTGGAGAATTGGCCATCCCATCTTGTGTATGTGGCTCATGGGAAATTACAATTAGCAATGCCAATGGAAAAGGTCAGGGAGATGAGCAATTTGTCACTAATGAGAACAGTGGAGAGTTGGCTAAGGAAGGAAAGAGATGAGGGGAGGAAAAGAAGGAAAGAACGAAAGGCAGTCGGCCTTCCAGAATTTGAAAGCCAAGTTGAGGGCAGCCGAGTGGCCGGGGACCCTGCTCGTGCTGCCGTTCGTGCATTGAACAATGGATGGGCTGCTGGAAGACTGCACTCCACCATTGCTGGTGAAGAGAATTTTTTCTTAAGTTCAAACAGTGTCTTGAGACAATAA 990 0.4768 MAVKDISKQTVEINNLRFTYPGIDGQPPPGSTPLIDHFSLTLNSGDRCLLVGSNGAGKTTILKILGGKHMVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVSAEKMIFGVSGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLAMPMEKVREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRVAGDPARAAVRALNNGWAAGRLHSTIAGEENFFLSSNSVLRQ* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0070 329 SMART AAA_5 44 231 IPR003593 GO:0016887
Vvi14g0070 329 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 254 IPR003439 GO:0005524
Vvi14g0070 329 Pfam ABC transporter 36 181 IPR003439 GO:0005524
Vvi14g0070 329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 247 IPR027417 -
Vvi14g0070 329 Gene3D - 8 274 IPR027417 -
Vvi14g0070 329 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 9 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0070 Vvi-Chr14 613573 616484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0070 3 227 Calmodulin-binding Proteins AT2G36910 23.554 2.11e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0070 K12608 - vvi:100259555 637.106