Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0067 ATGGGTGGTGATTATCTGCCTTTTCTGGCCATGTTTCTTGTCCAAATGGGCTATGCTGGAATGAATATCTTTGTGAAGCTGGCCATGGATTCTGGGATGAACCCCTTCATCCTCGTCGCTTATAGGCAAATCTTTGCCACTGTGGCCATGATTCCTTTTGCTTATTTTCTTGAGAGTGTTGTAGGGTCTCTGTTTGTTGTTTTGGGGCTCTATGCTGTTCTATGGGGAAAGGGTAAGGAGGAGAACCAGAGGGGCAGCAGGGAAGAGGCAGAAGAGGGGAAGGAAGACTTGGAGTTGCAGATAAATGGGAAGCTTTACATCAGAAAGGATCCTAACCCAGACCAACGGCGTCTAAACGTCCGTCACATTCGACCATCTATAAATGCTAGAGTCTCCTATCAATTCCTTCTCCTCTCGTTTGGGCAGCTTCTCGAGATCTGCCCTCTACGTTTCCCAAAATTACTATTCTGTCCTTACCAGACGCAAAACATGGGGTTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAAGAGATGCGAATTCTTATGGTGGGTCTTGATGCTGCTGGTAAGACCACCATTTTGTACAAGCTCAAGCTGGGAGAGATCGTTACCACCATTCCCACAATTGGATTTAATGTGGAGACTGTGGAATATAAGAACATTAGCTTTACTGTCTGGGATGTTGGTGGCCAGGACAAGATTCGTCCTTTGTGGAGACACTACTTCCAGAACACTCAGGGTCTCATCTTCGTGGTTGATAGCAATGATCGTGACCGTGTAGTTGAGGCTAGGGACGAGCTACACAGGATGTTGAATGAGGATGAATTGAGGGATGCAGTGCTGCTTGTTTTTGCAAACAAGCAAGATCTTCCAAATGCCATGAATGCTGCTGAGATTACTGATAAGCTCGGTCTCCACTCTCTCCGTCAACGCCATTGGTAA 951 0.4658 MGGDYLPFLAMFLVQMGYAGMNIFVKLAMDSGMNPFILVAYRQIFATVAMIPFAYFLESVVGSLFVVLGLYAVLWGKGKEENQRGSREEAEEGKEDLELQINGKLYIRKDPNPDQRRLNVRHIRPSINARVSYQFLLLSFGQLLEICPLRFPKLLFCPYQTQNMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHW* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0067 316 Gene3D - 160 316 IPR027417 -
Vvi14g0067 316 PRINTS GTP-binding SAR1 protein signature 182 205 IPR006689 GO:0003924|GO:0005525
Vvi14g0067 316 PRINTS GTP-binding SAR1 protein signature 210 234 IPR006689 GO:0003924|GO:0005525
Vvi14g0067 316 PRINTS GTP-binding SAR1 protein signature 282 303 IPR006689 GO:0003924|GO:0005525
Vvi14g0067 316 PRINTS GTP-binding SAR1 protein signature 237 262 IPR006689 GO:0003924|GO:0005525
Vvi14g0067 316 FunFam ADP-ribosylation factor 1 165 316 - -
Vvi14g0067 316 NCBIfam small GTP-binding protein domain 179 301 IPR005225 GO:0005525
Vvi14g0067 316 Coils Coil 80 100 - -
Vvi14g0067 316 Pfam ADP-ribosylation factor family 168 316 IPR006689 GO:0003924|GO:0005525
Vvi14g0067 316 PANTHER ADP RIBOSYLATION FACTOR-RELATED 164 316 IPR024156 GO:0005525
Vvi14g0067 316 SMART arf_sub_2 164 316 - -
Vvi14g0067 316 SMART sar_sub_1 164 316 IPR006689 GO:0003924|GO:0005525
Vvi14g0067 316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 316 IPR027417 -
Vvi14g0067 316 CDD Arf1_5_like 181 316 IPR045872 GO:0003924
Vvi14g0067 316 ProSiteProfiles small GTPase Arf family profile. 174 316 - -
Vvi14g0067 316 SMART rab_sub_5 181 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0067 Vvi-Chr14 593133 600070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0067 4 58 Nodulin-like Gene Family AT1G09380 72.727 6.72e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0067 K07937 - oeu:111394399 308.531