Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0053 ATGGGCTTGCAAGACATTGTTCATCTGTTGGTAGAGCCTACCATTATTTCCCCCAAACAACAGCACCAGAAGGACGTTGCTGCATGGGCAGTTAAGAGGAAGCATCGCATCACAAAGAAGCTGTATTCAAGGTCCATAGTGCCTGTCGCATTGGAGGTGTGGTTCGCTAACATCAAGAGAGTGGGTATACCCAATTACCTGGTTGTGGCATTAGATGACGACATTGGAAATTTCTGCAAATCCAATAATGTCCCAGTGTACAAGAGAGACCCAGATGAAGGTATTGATTCAGTTGCAAGAACAGGAGGTAACCATGCTATCTCAGGACTGAAGTTTCGGATCTTGGGGGAGTTCTTACAGCTAGGTTACATTGTTCTGTTTTCAGATATTGACATAGTTTACTTGCAAAATCCATTTGATTATCTTTACCGTGATTCTGATGTGGAATCCATGACTGATGGTCACAACAACTATACAGCTTATGGATGTAATGATGTCTTTGATGAACCAGCTATGGGTTGGGCTCGATATGCTCACGCCATGAGGATATGGGTATATAACTCTGGTTTTTTTTTCTACATAAGACCGGTGTGTTTCCAGCTATGGATTTCAGATGATCAACATGCCACATCTCAGTGTAACTTGGATGAACCTGGAAAGTGGATTCAGTACCATGCAGGAGACTTTGTTGCTGATAGCTTTGATGCTAGACCATGCATTATTTAG 726 0.4256 MGLQDIVHLLVEPTIISPKQQHQKDVAAWAVKRKHRITKKLYSRSIVPVALEVWFANIKRVGIPNYLVVALDDDIGNFCKSNNVPVYKRDPDEGIDSVARTGGNHAISGLKFRILGEFLQLGYIVLFSDIDIVYLQNPFDYLYRDSDVESMTDGHNNYTAYGCNDVFDEPAMGWARYAHAMRIWVYNSGFFFYIRPVCFQLWISDDQHATSQCNLDEPGKWIQYHAGDFVADSFDARPCII* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0053 241 Pfam Nucleotide-diphospho-sugar transferase 63 192 IPR005069 -
Vvi14g0053 241 PANTHER ARABINOSYLTRANSFERASE RRA3 45 206 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0053 Vvi-Chr14 490450 491623 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0053 19 53 Cytoplasmic Ribosomal Protein Gene Family AT3G53020 62.857 2.27e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0053 K20783 - vvi:100240902 468.388