Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0049 ATGCCAACCTTGCTCTTTTGCATCATGTTCTTTCTCACTGTATCAGTCTCATCTGCATCTCTTAAAGTAGGCTTCTACAAATATACTTGCCCTTCTGCTGAGACAATTGTGAGGAAAGTAGTGAACAAGGCTGTGTCGCAGAATCCTGGCATGGCTGCTGGCCTCATTAGGATGCATTTCCATGACTGCTTTGTTAGGGGTTGTGATGGCTCGGTCCTACTTGATTCAACGCCTGGAAATCCATCGGAAAAGGAAAATCCAGCAAATAATCCAAGCTTGAGAGGTTTTGAGGTGATTGATGCTGCAAAGGCTGAAATTGAAGCTCAATGCCCACAAACTGTGTCTTGTGCAGATGTCCTTGCATTTGCCGCACGTGACAGTGCCTACAAGGTTGGAGGAATCAACTATGCCGTGCCATCAGGACGTCGCGATGGAAGAGTATCACTGAAAGATGAGCCTTCCCTACACCTGCCCCCTCCTTTCTTCAATGCCAAACAGCTTGAGGATAATTTTGCACGAAAGGGCCTCACTCTTGATGAAATGGTGACACTCTCTGGGGCACATTCTATAGGGGTGTCCCATTGTTCTTCCTTCTCAAACCGCCTCTATTCTTTCAATGCCACTCACCCTCAAGATCCTTCAATGGACCCCGAGTTTGCTAGACACTTGAAAACCAAGTGTCCCCCGCCATCAAACACAGGCAGTGATCCAACAGTGCCACTTGAGATTCAGACACCAAATAAGCTGGACAATAAGTACTATAAAGATTTGAAGAACACAGGGGCTTATTGGCATCAGATCAGACTCTTTTCTACAGCCCTTCAACAGCGAGGATGGTGA 840 0.4667 MPTLLFCIMFFLTVSVSSASLKVGFYKYTCPSAETIVRKVVNKAVSQNPGMAAGLIRMHFHDCFVRGCDGSVLLDSTPGNPSEKENPANNPSLRGFEVIDAAKAEIEAQCPQTVSCADVLAFAARDSAYKVGGINYAVPSGRRDGRVSLKDEPSLHLPPPFFNAKQLEDNFARKGLTLDEMVTLSGAHSIGVSHCSSFSNRLYSFNATHPQDPSMDPEFARHLKTKCPPPSNTGSDPTVPLEIQTPNKLDNKYYKDLKNTGAYWHQIRLFSTALQQRGW* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0049 279 CDD secretory_peroxidase 21 259 IPR033905 GO:0004601|GO:0042744
Vvi14g0049 279 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 Pfam Peroxidase 37 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 Gene3D - 24 157 - -
Vvi14g0049 279 FunFam Peroxidase 158 271 - -
Vvi14g0049 279 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Vvi14g0049 279 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Vvi14g0049 279 ProSiteProfiles Plant heme peroxidase family profile. 20 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PANTHER PEROXIDASE 25-RELATED 11 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 SUPERFAMILY Heme-dependent peroxidases 21 262 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi14g0049 279 Gene3D Peroxidase, domain 2 158 261 - -
Vvi14g0049 279 FunFam Peroxidase 24 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0049 Vvi-Chr14 465112 466070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0049 1 263 Peroxidase AT1G05260 47.566 8.37e-81 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0049 K00430 - vvi:100245996 525.783