Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0044 ATGACAGTTTTCTTGCGTACTCGGATGGATGTTGATATCATTCATGCAAACTACTATCTTGGCTCCTTGTTCTATGCGCTTGTTATACTTCTAGTTGATGGGTTCCCTGAGTTGTCCATGACTGTTTCAAGACTTCCAGTCTTCTACAAACAGAGGGACTTGTGCTTTTATCCAGCTTGGGCTTACACAATCCCAGCTACTATTCTAAAAATTCCTCTTTCCTTTGTGGAATCTCTGGTTTGGACATCTCTTACTTACTATGTCATTGGGTACAGTCCTGAGTTCGGGCGGTTCCTCCGTCAGTTTATTCTATTTTTTTCTGTGCACTTGTCATCAGTATCCATGTTCCGTTTCTTCGCTTCAGTCTCCAGGACTATGGTTGCTTCTGCAACAGCTGGTAGTTTTGCAATATTATTAGTCCTATTATTTGGTGGCTTCATTATCCCACAGCCCTCTATGCCAGATTGGTTGAAGTGGGCATTTTGGATATCCCCAATGACATATGGAGAGATAGGCCTTGCAGTAAACGAATTTCTAGCTCCGCGATGGCAAAAGACACTGTCCACAAACACAACACTAGGGCGTGAGACACTTGAAAATCGGGGGCTGAACTTTGATGGATACCTTTTCTGGATATCACTTGCTGCATTATTTGGAGTTACAATAATTTTCAACATCGGATTCACCTTGGCCTTGAGTTTTTTACAGGCTCCTGGAAAGTCTCGTGCTATTATATCACATGAAAAGCTATCCCAACTTCAAGGAAGGGATCAATCCACCAATGGTGCATATGAGGAAAAAGAGTCAAAAAATCCTCCTCCTAAAACTACCAAGGAGGCTGATATAGGAAGGATGGTTTTGCCTTTTCAACCCCTGACAGTATCATTCCAGGATGTGCAATACTATGTAGACACACCTGTGGAAATGAGACAAAAGGGTTTCGCTCAGAAAAAACTCCATCTTCTTCATGATGTTACTGGGTCATTGAGGCCTGGTGTCCTCACAGCATTGATGGGAGTTAGTGGAGCTGGAAAAACAACTCTTATGGATGTTCTTGCTGGAAGAAAAACTAGTGGCACCATTGAAGGAGAGATTAGAATCGGAGGGTATCCTAAGGTTCAAGAAACATTTGCTAGGATTTCGGGCTACTGTGAGCAAACTGACATACATTCTCCACAAATTACTATAGAAGAATCAGTGATTTTTTCTGCTTGGCTTCGTTTGTCTCCTCAGATTGATTCAAAAACTAAAGCTGAATTTGTGAATGAAGTGCTTGAGACCATTGAGCTTGATGGAATCAAAGATGCTTTAGTAGGTATGCCTGGTGTTGGTGGTTTATCAACTGAGCAACGAAAGCGTCTGACAATAGCAGTGGAGCTTGTGTCCAACCCCTCCATTATCTTCATGGATGAACCTACATCAGGTTTGGATGCAAGAGCAGCTGCAGTAGTCATGCGAGCGGTGAAGAATGTGGTTGATACTGGCAGAACAATTGTTTGCACCATCCACCAACCGAGTATTGACATATTTGAAGCATTTGATGAGTTGATTCTATTGAAAACTGGTGGACATCTGATCTACTGTGGACCACTGGGTCAGCATTCAAGTAGGGTTATCGAGTATTTTGAGGGTATTCCTGGGGTTCCAAAGATCAGAAATAACTACAATCCAGCAACATGGATGCTAGAGGTGACCTCTACATCTGCAGAAGCTGAACTTGGCGTAGATTTTGCTCAAATTTACAAGGATTCTGCTCTATATGAGAACAACAAAGAGCTTGTAAAGCAATTGAGCATTCCACCTCATGGTTCAGAAGACCTGCATTTCCCAACCCGCTTTGCACGAAATGGTTGGAGTCAATTCAAATCTTGCTTATGGAAGCAGCACTTGTCTTATTGGAGAAGTCCCTCATACAATATAACACGTACCATGCATATGCTTGTCGCATCTTTGCTCTTTGGGATACTGTTTTGGAAGCAAGGAAAAGAACTGAATAACCAGCAGGGTGTGTTCAATGTACTTGGTTCAATGTACGTCGCTGTGATCTTCTTGGGCATAAATAACTGTTCGACGGTATTACCACATGTCACAAATGAGCGAACTGTTCTTTACCGTGAAAAATTTGCAGGGATGTACTCTTCATGGGCTTACTCACTTGCTCAGGTGACAATTGAAATTCCCTACCTATTTATCCAGACACTTATATATGTGATCATCACATATCCAATGATAGGATACTACTCGTCGGTTTATAAGATTTTCTGGTACTTCTATGCCATGTTCTGCACATTGCTGTACTACAATTATCTGGGAATGCTGCTTGTGGCAATGACACCAAGCTTTCCTGTAGCGTCAATCCTATCCTCTGCCTTCTACACAATTTTCAATCTGTTTGCGGGGTTTCTGATTCCTCAACCGCAAGTTCCTAAATGGTGGCTTTGGTTGTTTTATCTGACTCCTACATCTTGGTCAATAACCGGTATGCTTACTTCACAGTATGGCGACATCCACAAGGACATTCTGGTATTTGGAGAGACTAAAACAGTGGCTACCTTCTTGAAAGACTACTACGGCTTTCACCATGATCGCTTGGCTGTTGTGGCTGTTATTCTTATCGCCTTCCCCCTGGCTTTTGCTTTTCTTTTTACATACTGTATACAAAGACTGAACTTCCAGAGGAGGTAA 2685 0.4223 MTVFLRTRMDVDIIHANYYLGSLFYALVILLVDGFPELSMTVSRLPVFYKQRDLCFYPAWAYTIPATILKIPLSFVESLVWTSLTYYVIGYSPEFGRFLRQFILFFSVHLSSVSMFRFFASVSRTMVASATAGSFAILLVLLFGGFIIPQPSMPDWLKWAFWISPMTYGEIGLAVNEFLAPRWQKTLSTNTTLGRETLENRGLNFDGYLFWISLAALFGVTIIFNIGFTLALSFLQAPGKSRAIISHEKLSQLQGRDQSTNGAYEEKESKNPPPKTTKEADIGRMVLPFQPLTVSFQDVQYYVDTPVEMRQKGFAQKKLHLLHDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGTIEGEIRIGGYPKVQETFARISGYCEQTDIHSPQITIEESVIFSAWLRLSPQIDSKTKAEFVNEVLETIELDGIKDALVGMPGVGGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVDTGRTIVCTIHQPSIDIFEAFDELILLKTGGHLIYCGPLGQHSSRVIEYFEGIPGVPKIRNNYNPATWMLEVTSTSAEAELGVDFAQIYKDSALYENNKELVKQLSIPPHGSEDLHFPTRFARNGWSQFKSCLWKQHLSYWRSPSYNITRTMHMLVASLLFGILFWKQGKELNNQQGVFNVLGSMYVAVIFLGINNCSTVLPHVTNERTVLYREKFAGMYSSWAYSLAQVTIEIPYLFIQTLIYVIITYPMIGYYSSVYKIFWYFYAMFCTLLYYNYLGMLLVAMTPSFPVASILSSAFYTIFNLFAGFLIPQPQVPKWWLWLFYLTPTSWSITGMLTSQYGDIHKDILVFGETKTVATFLKDYYGFHHDRLAVVAVILIAFPLAFAFLFTYCIQRLNFQRR* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0044 894 SMART AAA_5 331 523 IPR003593 GO:0016887
Vvi14g0044 894 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 894 - -
Vvi14g0044 894 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 294 547 IPR003439 GO:0005524
Vvi14g0044 894 Pfam ABC-2 type transporter 2 178 IPR013525 GO:0016020|GO:0140359
Vvi14g0044 894 Pfam ABC-2 type transporter 620 832 IPR013525 GO:0016020|GO:0140359
Vvi14g0044 894 MobiDBLite consensus disorder prediction 261 277 - -
Vvi14g0044 894 MobiDBLite consensus disorder prediction 252 280 - -
Vvi14g0044 894 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 308 533 IPR027417 -
Vvi14g0044 894 Pfam ABC transporter 322 474 IPR003439 GO:0005524
Vvi14g0044 894 CDD ABCG_PDR_domain2 291 529 IPR034003 -
Vvi14g0044 894 Gene3D - 306 542 IPR027417 -
Vvi14g0044 894 Pfam Plant PDR ABC transporter associated 183 245 IPR013581 -
Vvi14g0044 894 Pfam ABC-2 type transporter 503 564 IPR043926 GO:0140359
Vvi14g0044 894 FunFam ABC transporter G family member 34 308 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0044 Vvi-Chr14 443766 448696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0044 307 506 Calmodulin-binding Proteins AT2G36910 24.638 2.32e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0044 K08711 - vvi:100256323 1775.37