Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0036 ATGGTGTCTGCTGGATTGCAGTCTTTGATTGATCATGAAGACAGTCTCAAGAGCCAGTTGAGTGCAGTTATCTCATATCAACAAACATGCAAGGATGGAATTAAACACCCATCAATCAGAGCAGTAATTGGGCTCAGGCTTCAGACTGTCACTGAGCTCACAAGCAATGCTTTAGCACTGGCAGAGGCTAGAGATGGTGGGTACCCTACTTGGTTCTCAGCAACTGACTGTGGGCTCTCGGAGTTACATGGCAAGGGGCTTCTGAAGCCCAATGTAGTTGTAGCTAAAGATGGCAGTGGGCAGTACAGAACAGTATTTGAAGCTGTTGTTGCATACTCTGAAAACAGGAACCACAGGGGGACATATGTCATCTATGTGAAGTCTGGAATGTATGAGGAGAACATCACCCTCAAAGTCCGCTGGGGTACAGTATCCATGTATGGTGATGGACCTAGAAAGACGATCATCACTGGCCGAAAGAATTGCCATGACCAATTTACGGCCCTGCGGACAGCCACCTTCTCTGTTCGTGGAAAAGGATTCATTGGCAGGTCAATGGCATTCCGGAACACAGCTGGGCCAGAAGGTGGCCAAGCCGTGGCTCTCCAAGTTCAGGCTGATATCCCATCGCCAATTCTACAGAGAGTAATCCAAAACTCTGTGATCATGGTCAAAAAGCCACTTGACAACCAGCAGAACACCATAACAGCCAGTGGTAGAGCTGATGATCGGCAAACCACAGGTTTTGTGATCCAGAACTGTCAAATAGTTCGAGGACAGGAACTCTTCCCTGTGAGGTTCAGTACAGCAACGTACTTAGGCAGACCATGGAAGCGATATTCAAGAACAGTTGTTATGGAATCAACACTGGGCGATTTGATTCATCCTAAAGGATGGTTGGCAAGGAATGGCACATTTGCAGTTGACACACTACTCTATGCTGAGTATGCCAACAAGGGGCCTGGAGCTGATACCAGCGGGAGAGTCGACTGGAAGGGTTACAAGGTCATCACCAACAGAACAGAAGCACTAGCCTATACAGTTGCTCCTTTTATTCAAGGAGACCAGTGGTTGAAAAGGAGTGGGATGCCCTTCCTCCTTGGCCTCAAACTTTGA 1116 0.4785 MVSAGLQSLIDHEDSLKSQLSAVISYQQTCKDGIKHPSIRAVIGLRLQTVTELTSNALALAEARDGGYPTWFSATDCGLSELHGKGLLKPNVVVAKDGSGQYRTVFEAVVAYSENRNHRGTYVIYVKSGMYEENITLKVRWGTVSMYGDGPRKTIITGRKNCHDQFTALRTATFSVRGKGFIGRSMAFRNTAGPEGGQAVALQVQADIPSPILQRVIQNSVIMVKKPLDNQQNTITASGRADDRQTTGFVIQNCQIVRGQELFPVRFSTATYLGRPWKRYSRTVVMESTLGDLIHPKGWLARNGTFAVDTLLYAEYANKGPGADTSGRVDWKGYKVITNRTEALAYTVAPFIQGDQWLKRSGMPFLLGLKL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0036 371 Pfam Pectinesterase 216 355 IPR000070 GO:0030599|GO:0042545
Vvi14g0036 371 Pfam Pectinesterase 91 208 IPR000070 GO:0030599|GO:0042545
Vvi14g0036 371 Gene3D - 86 209 IPR012334 -
Vvi14g0036 371 Gene3D - 213 369 IPR012334 -
Vvi14g0036 371 PANTHER PECTINESTERASE 216 359 - -
Vvi14g0036 371 Gene3D Invertase/pectin methylesterase inhibitor family protein 4 63 IPR035513 -
Vvi14g0036 371 Pfam Plant invertase/pectin methylesterase inhibitor 13 60 IPR006501 GO:0004857
Vvi14g0036 371 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 14 61 IPR035513 -
Vvi14g0036 371 SUPERFAMILY Pectin lyase-like 89 368 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0036 Vvi-Chr14 371156 372452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0036 16 369 Carbohydrate Esterase AT2G26450 41.975 7.65e-99 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0036 K01051 - vvi:100242515 396.741