Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0029 ATGGATAGAAGATGGTACAGTGGTAGACAGGAAACAAGCTCTCGTGATAATAGGCAACGTGAAAGGGAGGAGGCATATAAGGATTCACTTGTTGAGGATTTGGCAGAGGATTTTCGTTTGCCTATCAATCATAAGCCAACAGAAAATGTTGATCTAGATAATGTGGAGCAAGCATCATTGGACACACAATTGACATCATCTAATATTGGGTTTAGGCTTCTTCAAAAAATGGGTTGGAAAGGAAAGGGTCTTGGGAAGGATGAGCAAGGAATTATTGAGCCAATAAAGTCTGGAATTAGAGATCCAAGATTAGGGGTTGGAAAACAAGAGGAAGATGATTTTTTCACTGCAGAGGAAAATATTCAGCGAAAAAAGCTGGATGTCGAGCTAGAGGAGACAGAGGAACATGCAAAGAAGCGGGAGGTGGTAGCAGAACGTGAGCAGAAAATTCAGACAGAGGTGAAAGAAATACGAAAGGTGTTCTATTGTGAGCTCTGCAACAAGCAATACAAACTGGCTATGGAATTTGAAGTTCACTTGAGCTCATATGATCACAACCACAGAAAGAGGTTTAAGGAAATGAGAGAAATGCACGGTACTAGCAGTCGTGATGATCGGCAAAAACGAGAACAACAACGTCAAGAGCGGGAGATGGCTAAGTTTGCTCTGATGGCGGATGCTCGAAAGCAGCAGCAGCAGCAGGAAGAGGAATCTGGAAACACTGCAGTTTCCACCACACTGAGAAGTGCCACCCCACTTGCTGATCAAGAGCAGCGGAAAGCATTAAAGTTTGGGTTTTCCTCCAAAGGTGGCATGTCCAAGAATTCATCAGGCAGTGCAGCAAAGAAGCCAAAAGTTTCTGTTGCTTCAGTTTTCAGCAACGATAGTGATGAAGAATAG 900 0.4333 MDRRWYSGRQETSSRDNRQREREEAYKDSLVEDLAEDFRLPINHKPTENVDLDNVEQASLDTQLTSSNIGFRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEEHAKKREVVAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEVHLSSYDHNHRKRFKEMREMHGTSSRDDRQKREQQRQEREMAKFALMADARKQQQQQEEESGNTAVSTTLRSATPLADQEQRKALKFGFSSKGGMSKNSSGSAAKKPKVSVASVFSNDSDEE* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0029 299 MobiDBLite consensus disorder prediction 195 223 - -
Vvi14g0029 299 SMART G-patch_5 64 109 IPR000467 GO:0003676
Vvi14g0029 299 MobiDBLite consensus disorder prediction 269 293 - -
Vvi14g0029 299 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Vvi14g0029 299 Pfam Zinc-finger double-stranded RNA-binding 161 188 IPR022755 -
Vvi14g0029 299 MobiDBLite consensus disorder prediction 195 299 - -
Vvi14g0029 299 MobiDBLite consensus disorder prediction 234 253 - -
Vvi14g0029 299 MobiDBLite consensus disorder prediction 1 27 - -
Vvi14g0029 299 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
Vvi14g0029 299 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
Vvi14g0029 299 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 299 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0029 1 299 C2H2 Transcription Factor Family AT5G26610 68.421 4.94e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0029 - - vvi:100244141 545.814