Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0025 ATGGCAGCCACCTGCATAGACATTCTCTTGGCCATCATCTTGCCCCCCCTTGGTGTCTTCCTCAAGTTTGGATGCCAGGCGGAGTTCTGGATCTGTTTGGTGCTGACTTTTTTCGGCTACCTTCCTGGAATTGTCTATGCTGTCTATGTCATCACCAAGTGGTGGGGGAATGTGGAGGGCCCATGGAGTTAG 192 0.5208 MAATCIDILLAIILPPLGVFLKFGCQAEFWICLVLTFFGYLPGIVYAVYVITKWWGNVEGPWS* 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0025 63 Pfam Proteolipid membrane potential modulator 5 51 IPR000612 GO:0016020
Vvi14g0025 63 ProSitePatterns Uncharacterized protein family UPF0057 signature. 9 24 IPR000612 GO:0016020
Vvi14g0025 63 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 53 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0025 Vvi-Chr14 276682 277439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0025 2 53 RCI2 Gene Family AT3G05890 76.923 4.70e-25 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0025 - - vvi:100259666 105.916