Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g0020 ATGGTGAAGGTAGTGGGTGTGGTCGTGGCCATTGTTGGACTTGTTTTTAGCAAATGGGTTTATGGTTTTGAGTTTGAAGAAAATGGGAGTTGGGTACATGGTCTTGATGATTTGAATGTCACAGAGCTCTCATTCTCAGTCTCTTATGGAGTCTCTGCTGCTAGCAGGCCTATGATGGTAGGCTTAACCCTTATTCACGCTGCTGCTGCGAAAGGGGCAGTTTGTTTAGATGGAACATTACCGGGGTATCATTTGCATCGTGGATATGGGTCAGGGGCAAACAGTTGGCTCATTCAATTGGAGGGGGGAGGATGGTGTAATAGCATTAGAACTTGTGTTTACCGCAAGAAAACTAGGAGAGGATCATCAATATATATGGAAAAGCAGATCCCATTTACCGGAATTCTGAGCAATAATCCTGAAGAAAATCCTGATTTTTTCAACTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCTTTTACTGGTGACAGCCAAAATCAGGCTGCACAACTGAATTTCAGAGGACAGCGTATCTGGTCAGCTGCTATAGAAGATTTAATGTCCAAGGGAATGCGCTATGCCAACCAGGCTCTTCTTTCTGGGTGCTCTGCTGGAGGTCTGGCAGCTATTTTGCACTGTGATGAGTTTCGAGGCTTTTTTCCAAGAAATACTAAAGTGAAGTGCCTGAGTGATGCTGGATTATTCCTTGATTCGATTGATGTATCCGGTGGGCGCACCCTTAGGAATCTCTTCAGTGGTGTAGTTAACTTGCAGGGGGTGCAAAGGAACCTGCCATCTTTTTGTTTGAATCGTCTTGATCCAACCTCGTGCTTCTTCCCACAGAACGTGATATCCAATATCAAAACCCCGCTATTTCTTCTCAATGCAGCCTATGATTCATGGCAGGTCCAGGCCAGTTTAGCTCCACCATCAGCTGATCCCCATGGCTATTGGAATGAATGCAAAAAGAACCATGCCCAGTGTTCTCCATCACAAATTCAATTCCTGCAAGGATTCAGGAATCAAATGCTGAATGCAATAAAAGGCTTCTCAATGTCTAAACAAAACGGGTTATTCATAAATTCATGTTTTGCTCACTGCCAGACAGAGAGGCAGGATACGTGGTTTGCTGATAATTCTCCCATTATTAAAAACAAGGGGATTGCTTTAGCTGTTGGAGACTGGTACTTCGACCGATCTGGCATTAAAGCCATCGACTGCCCCTACCCTTGTGACAAGACCTGCCACAATCTAGTATTCCGATGA 1272 0.4434 MVKVVGVVVAIVGLVFSKWVYGFEFEENGSWVHGLDDLNVTELSFSVSYGVSAASRPMMVGLTLIHAAAAKGAVCLDGTLPGYHLHRGYGSGANSWLIQLEGGGWCNSIRTCVYRKKTRRGSSIYMEKQIPFTGILSNNPEENPDFFNWNRVKLRYCDGASFTGDSQNQAAQLNFRGQRIWSAAIEDLMSKGMRYANQALLSGCSAGGLAAILHCDEFRGFFPRNTKVKCLSDAGLFLDSIDVSGGRTLRNLFSGVVNLQGVQRNLPSFCLNRLDPTSCFFPQNVISNIKTPLFLLNAAYDSWQVQASLAPPSADPHGYWNECKKNHAQCSPSQIQFLQGFRNQMLNAIKGFSMSKQNGLFINSCFAHCQTERQDTWFADNSPIIKNKGIALAVGDWYFDRSGIKAIDCPYPCDKTCHNLVFR* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g0020 423 PANTHER NOTUM-RELATED 51 419 IPR004963 GO:0016787
Vvi14g0020 423 Pfam Pectinacetylesterase 54 402 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi14g0020 Vvi-Chr14 230649 237490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi14g0020 19 423 Carbohydrate Esterase AT1G57590 69.343 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g0020 K19882 - vvi:100264849 876.7