Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1531 ATGGCGGACGCACTCCTCTCGGCTTCTCTTCAAGTTCTATTCGACAAGTTGGCTTCTCCGGAGCTCGTCAACTTCATCCGGGGACAGAAGCTTAGCCAAGAACTCCTCACCGACTTTAAGAGGAAATTGCTGGTTGTCCACAAAGCGCTCAATGATGCGGAGGTGAAGCAATTTTCAGACCCACTGGTCAAAGAGTGGCTGGTCCAAGTTAAGGATGTTGTGTATCATGCGGAGGACCTGTTGGACGAGATCGCTACCGAAGCCTTGCGGTGCGAGATAGAAGCTGCTGAGGTCCAAACTGGCGGAATTTATCAGGTGTGGAACAAGTTCTCTACCAGGGTTAAGGCTCCCTTTGCCAACCAAAGCATGGAGTCCAGGGTCAAGGGCTTGATGACCAGACTTGAAAACATAGCAAAAGAAAAAGTTGAGCTTGAGCTGAAAGAAGGTGATGGTGAGAAACTGTCACCAAAATTACCATCCTCTTCTTTGGTGGATGACTCCTTCGTGTACGGCAGGGGTGAAATTAAGGAGGAGTTGGTGAAGTGGTTGCTTTCTGACAAGGAAACTGCAGCAGCCAACAACGTCATAGATGTGATGTCCATAGTGGGCATGGGCGGCAGCGGCAAGACCACACTCGCTCAGCTTCTCTATAACGATGACAGAGTGAAGGAACACTTTCACCTGAAAGCATGGGTCTGTGTTTCCACGGAGTTTCTTCTTATCGGTGTAACCAAATCAATTCTTGAGGCAATCGGTTGTAGACCTACTTCCGATCACAGCCTAGATTTGCTTCAACGTCAACTCAAAGACAACCTTGGCAACAAGAAATTTCTGCTCGTTCTCGACGACGTCTGGGATGTGGAGTCTCTTCATTGGGAAAGTTGGGATAGACTACGAACTCCACTCCACGCTGCAGCCCAGGGAAGCAAGATTGTTGTGACCAGTCGTAGCGAAACTGTTGCAAAAGTCATGCGTGCAATCCATACTCATCAGCTGGGAACATTAAGCCCTGAAGATAGTTGGTCCCTATTTACAAAACTTGCATTTCCAAGTGGAGACCCCTGCGCTTATCCTCAGCTTGAACCCATAGGCAGAGAGATTGTGAAGAAGTGCCAAGGATTGCCTTTGGCTATGAAAGCACTCGGGAGTCTCTTGTACTCTAAGCCCGAAAGAAGAGAATGGGAAGATATTTTGAATAGCAAAACATGGCATTCTCAGACTGATCATGAAATTCTTCCATCTCTTAGATTGAGTTATCAGCATCTCTCTCCTCCTGTGAAGCGTTGTTTTGCTTACTGTTCAATTTTTCCCAAGGATTATGAATTTGACAAAGAGAAGCTGATTCTATTATGGATGGCAGAAGGGCTTTTACACTCAGGACAAAGTAACAGAAGAATGGAAGAGGTAGGTGATTCATATTTTAATGAACTTTTAGCAAAGTCATTCTTTCAAAAATGTATTAAAGGAGAAAAATCATGCTTTGTAATGCATGATTTAATACATGACTTGGCTCAACATATCTCCCAAGAATTTTGCATTCGATTGGAAGATTATAAGGTGCAAAAAATATCTGATAAGGCTCGCCATTTTCTCCACTTTAAAAGTGACGATGACTGGGCAGTTGTATTTGAAACTTTTGAGCCTGTTTGTGAAGCCAAACATCTCAGAACAATCTTAGAGGTGAAGACATTATGGCACCATCCTTTTTATTCGTTGAGTACAAGAGTTTTACAAAATATATTACCAAAATTTAAATCCTTGCGCGTATTGTCATTGTGTGAATACTGCATAACAGATGTGCCTGATTCAATACACGATTTAAAACAGTTGCGCTACTTGGATCTCTCTACAACAATGATTAAAAGATTGCCTGAATCAATATGTTGTTTGTGCAATTTACAAACAATGATGCTGAGTAAATGTCCCCTTCTTCTTGAATTGCCTTCGAAAATGGGGAAGTTGATTAATTTGTGCTATCTTGATATTAGCGGGTCTACTTCATTGAAAGAAATGCCAAATGATATAGATCAATTAAAAAGTTTGCATAAATTGCCTAATTTTATTGTGGGCAAAGAAAGTGGATTCCGATTTGGAGAATTGTGGAAGCTTTCAGAGATTCAAGGAAGACTTGAAATTTCAAAAATGGAGAATGTGGTGGGTGTTGAGGATGCATTGCAGGCGAATATGAAGGATAAGAAATACCTTGATGAGTTATCCTTGAATTGGAGTTACGAGATTAGTCATGATGCTATACAAGATGAAATTCTCAACAGGTTATCACCTCATCAAAATTTAAAAAAACTGTCCATTGGAGGGTATCCTGGTCTAACATTTCCAGATTGGCTTGGAGACGGATCATTTTCAAATCTCGTGTCCCTTCAGCTTTCGAATTGTGGGAATTGCTCAACATTGCCGCCACTGGGGCAGCTACCTTGTCTTGAACATATAAAGATCTCAAAAATGAGTGGAGTAGTGATGGTGGGTAGTGAGTTTTATGGGAATTCTTCTTCCTCGCTTCATCCCTCCTTCCCATCCCTGCAAACTCTATCATTTGAAGATATGTCCAATTGGGAGAAATGGTTATGTTGTGGAGGCATATGTGGAGAATTCCCTGGTCTCCAGAAGCTTTCTATATGGCGGTGTCGCAAATTCTCTGGGGAATTACCAATGCACCTTTCTTCATTGCAGGAACTTAACCTTAAAGATTGTCCGCAACTGCTTGTGCCTACACTCAACGTTCCTGCTGCTCGTGAATTACAGTTGAAAAGGCAAACTTGTGGGTTCACAGCTAGTCAAACTTCAAAAATTGAAATTTCAGACGTCTCTCAGTTGAAGCAACTTCCACTGGTACCCCACTATCTCTACATTAGAAAATGTGATTCTGTGGAGTCTCTACTAGAGGAGGAAATCCTGCAAACCAACATGTACAGTTTGGAAATTTGTGATTGCTCTTTTTACAGATCCCCAAACAAAGTTGGCTTACCCACTACATTGAAATCGCTATCAATCTCTGATTGTACCAAATTGGACCTTCTTCTACCTGAGTTGTTCAGATGCCATCACCCGGTTCTCGAAAATCTATCAATCAATGGCGGTACCTGTGATTCTCTCTCGTTGTCCTTCTCAATATTGGACATCTTTCCCAGGTTGACTTATTTCAAAATGGATGGTCTTAAGGGGCTTGAGGAGCTCTGCATCTCGATTTCAGAGGGGGATCCCACATCTCTTCGTCAATTGAAAATCGATGGGTGCCCTAATCTTGTATACATCCAATTGCCCGCTCTCGATTTGATGTGCCATGAGATTTGCAATTGCTCCAATCTCAAATTGTTGGCGCACACCCATTCATCTCTGCAGAAACTGTGTTTAGAGTATTGTCCAGAATTGTTGTTGCACAGAGAGGGTTTGCCTTCCAACCTACGGAAACTTGAAATACGGGGCTGCAACCAACTCACGTCACAGATGGACTTGGATTTGCAGAGACTGACCTCTCTTACTCATTTCACAATCAATGGTGGATGTGAAGGCGTGGAATTATTTCCCAAGGAGTGTCTGCTGCCCTCTTCTCTAACTCATCTTTCAATCTGGGGTCTTCCAAATCTCAAGTCTCTTGACAACAAGGGGCTTCAACAACTCACCTCTCTTCGAGAATTATGGATCGAGAACTGCCCTGAGCTCCAATTCTCGACAGGATCTGTTCTTCAACGCCTTATCTCTCTCAAGAAATTAGAAATCTGGTCGTGCAGAAGGCTCCAATCCTTGACAGAAGCGGGTCTTCACCACCTCACCACTCTTGAAACCTTAACTCTCTCGGATTGCCCTAAGCTCCAATACTTGACAAAAGAGAGACTGCCAGGCTCCCTCTCTCATCTGGACGTCTACGATTGTCCTCCACTGGAACAACGGCTCCAATTCGAGAAAGGGCAAGAATGGCGTTATATATCTCACATTCCAAAAATAGAGATCAATTGGGTGCTATTTTAA 3984 0.4292 MADALLSASLQVLFDKLASPELVNFIRGQKLSQELLTDFKRKLLVVHKALNDAEVKQFSDPLVKEWLVQVKDVVYHAEDLLDEIATEALRCEIEAAEVQTGGIYQVWNKFSTRVKAPFANQSMESRVKGLMTRLENIAKEKVELELKEGDGEKLSPKLPSSSLVDDSFVYGRGEIKEELVKWLLSDKETAAANNVIDVMSIVGMGGSGKTTLAQLLYNDDRVKEHFHLKAWVCVSTEFLLIGVTKSILEAIGCRPTSDHSLDLLQRQLKDNLGNKKFLLVLDDVWDVESLHWESWDRLRTPLHAAAQGSKIVVTSRSETVAKVMRAIHTHQLGTLSPEDSWSLFTKLAFPSGDPCAYPQLEPIGREIVKKCQGLPLAMKALGSLLYSKPERREWEDILNSKTWHSQTDHEILPSLRLSYQHLSPPVKRCFAYCSIFPKDYEFDKEKLILLWMAEGLLHSGQSNRRMEEVGDSYFNELLAKSFFQKCIKGEKSCFVMHDLIHDLAQHISQEFCIRLEDYKVQKISDKARHFLHFKSDDDWAVVFETFEPVCEAKHLRTILEVKTLWHHPFYSLSTRVLQNILPKFKSLRVLSLCEYCITDVPDSIHDLKQLRYLDLSTTMIKRLPESICCLCNLQTMMLSKCPLLLELPSKMGKLINLCYLDISGSTSLKEMPNDIDQLKSLHKLPNFIVGKESGFRFGELWKLSEIQGRLEISKMENVVGVEDALQANMKDKKYLDELSLNWSYEISHDAIQDEILNRLSPHQNLKKLSIGGYPGLTFPDWLGDGSFSNLVSLQLSNCGNCSTLPPLGQLPCLEHIKISKMSGVVMVGSEFYGNSSSSLHPSFPSLQTLSFEDMSNWEKWLCCGGICGEFPGLQKLSIWRCRKFSGELPMHLSSLQELNLKDCPQLLVPTLNVPAARELQLKRQTCGFTASQTSKIEISDVSQLKQLPLVPHYLYIRKCDSVESLLEEEILQTNMYSLEICDCSFYRSPNKVGLPTTLKSLSISDCTKLDLLLPELFRCHHPVLENLSINGGTCDSLSLSFSILDIFPRLTYFKMDGLKGLEELCISISEGDPTSLRQLKIDGCPNLVYIQLPALDLMCHEICNCSNLKLLAHTHSSLQKLCLEYCPELLLHREGLPSNLRKLEIRGCNQLTSQMDLDLQRLTSLTHFTINGGCEGVELFPKECLLPSSLTHLSIWGLPNLKSLDNKGLQQLTSLRELWIENCPELQFSTGSVLQRLISLKKLEIWSCRRLQSLTEAGLHHLTTLETLTLSDCPKLQYLTKERLPGSLSHLDVYDCPPLEQRLQFEKGQEWRYISHIPKIEINWVLF* 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1531 1327 FunFam Probable disease resistance protein At1g61300 160 329 - -
Vvi13g1531 1327 Pfam NB-ARC domain 196 400 IPR002182 GO:0043531
Vvi13g1531 1327 Gene3D Ribonuclease Inhibitor 697 926 IPR032675 -
Vvi13g1531 1327 Gene3D Ribonuclease Inhibitor 561 685 IPR032675 -
Vvi13g1531 1327 Gene3D Ribonuclease Inhibitor 1097 1230 IPR032675 -
Vvi13g1531 1327 Gene3D Ribonuclease Inhibitor 930 1096 IPR032675 -
Vvi13g1531 1327 Gene3D Ribonuclease Inhibitor 1231 1308 IPR032675 -
Vvi13g1531 1327 Gene3D - 334 418 IPR042197 -
Vvi13g1531 1327 SUPERFAMILY L domain-like 492 920 - -
Vvi13g1531 1327 Coils Coil 120 147 - -
Vvi13g1531 1327 Gene3D - 153 329 IPR027417 -
Vvi13g1531 1327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 433 IPR027417 -
Vvi13g1531 1327 PANTHER DISEASE RESISTANCE PROTEIN RP 54 884 IPR044974 GO:0006952
Vvi13g1531 1327 Gene3D - 10 124 - -
Vvi13g1531 1327 PRINTS Disease resistance protein signature 271 285 - -
Vvi13g1531 1327 PRINTS Disease resistance protein signature 890 906 - -
Vvi13g1531 1327 PRINTS Disease resistance protein signature 198 213 - -
Vvi13g1531 1327 PRINTS Disease resistance protein signature 371 385 - -
Vvi13g1531 1327 Gene3D - 419 507 IPR036388 -
Vvi13g1531 1327 Pfam Rx N-terminal domain 6 95 IPR041118 -
Vvi13g1531 1327 FunFam Probable disease resistance protein At1g63360 419 506 - -
Vvi13g1531 1327 SUPERFAMILY L domain-like 972 1301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1531 Vvi-Chr13 24110046 24114029 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1531 196 395 WRKY Transcription Factor Family AT5G45050 27.805 6.01e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1531 - - vvi:104881347 2642.84