Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1444 ATGAGCACTCCTACTAGGAAAGAAGGTCTCAGAAGTCCTTCCTTACTAAACGGGGCACCATGGATGCTTACAGTGAAAGCAGACACCATAGACAAAGACATCAAGACTACAACCAATCTTGGAAACGGGAAATATTTTGATGAGGAATCATTTTTCCAATCGAGTGATCTTCCATCAAAATTATTACCTATTGTGTATACAGGCTCTAACGGCAATGTGTCATCAGCATTTTGCAACCAAGGATCAGTGAAAGACGAGAAACATTAG 267 0.4045 MSTPTRKEGLRSPSLLNGAPWMLTVKADTIDKDIKTTTNLGNGKYFDEESFFQSSDLPSKLLPIVYTGSNGNVSSAFCNQGSVKDEKH* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1444 88 Gene3D Peptidase S8/S53 domain 12 30 IPR036852 GO:0004252|GO:0006508
Vvi13g1444 88 Gene3D - 31 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1444 Vvi-Chr13 23282919 23283185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1444 9 87 Subtilisin-like Serine Gene Family AT5G67360 43.750 1.94e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1444 - - gmx:100782009 80.4925