Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1435 ATGGGCACCTTTACTGATCTCCAATACTATACCATCTTCTTCATCCTCTCCTTCATTTCAACCCTCCTGCTAAGATCCTTCCTAAACAGAATCACAACACCAACTACCCGTCTTCGCCTCCCACCTAGCCCACCGGCTCTTCCCATCATCGGCCACCTCCGCCTCCACTTCCTTTCTTCATCCATATACAAATCCTTCCACAGCCTCTCCACCCAGTATGGCCCCCTCCTTTATCTCCATTTTGGGGCCTCCAGGTGCCTACTTGTTTCTTCAGCAGCAATGGCTGCTGAGATCTTCAAAACAAACGATCTCGCCTTTGCTAGTCGCCCTAGGTTAGCTTTTGCCGATAAACTACCTTATGGAACCTCTAGTTTTATCACAGCTGAGTATGGAGATTACTGGAGGTTCATGAAGAAACTGTGCGTGACGGAGCTGCTTGGAGTCAAGCAACTTGAACGCTCACGGGTAGTTAGAAGAGAAGAACTGGATTGTTTCTTGAAGAAATTGGTGGAGAGTGGTGAGAATGGTGAGGCTGTGGATGTTAGGGCTGAGGTGATGAAGCTCACAAACCACAGTACATGCCGGGTGATTCTGAGCGCAAGGTGTTCAGAGGACAATGATGAAGCTGAAAGGTTGATAGAGATGGTGACGGAGTGGGTTGAGTTGGCTGTAAAGATGTCTTTTGGGGATGTGTTTGGCCCTCTGAAGAGGTTGGGTTTCTGGATCTATGGGAGGAAAGCCGTAGAGCTGACACTGAGGTATGATGAGATTCTGGAGAAGATGTTGAAGGAGCACGAAGAGAGGGGAAAGAGAGAAGACAAGGATTTGATGGATGTTCTCTTAGAGGTTTATCAAGATGATAAGGCTGGGATGAAGCTCACCAGAACCCATATCAAGGCTTTCATTCTGGATCTCTTTATGGCAGGCACCAATACCTCAGCAGAAAGCATGCAATGGACAATAGCCGAGCTCATTAACCATCCTGATGTGTTCAAGAAGGTCCGGGAAGAGATAGATTTAGCAGTCGGACGCACTAGACTTGTTGAGGAATCAGACATCCCAAACCTTCCCTACTTGCAAGCAGTTGTTAAGGAAACACTGAGACTACACCCTCCAGCGCCAGTGGCCACAAGAGAATGCCGCAAAAACTGTAAAATTGGTGGATTCAATATACCCGAAAAAACTGCAGTAGCAATCAATCTGTATGCTATTATGAGGGATCCAGAGATATGGGATGATCCTACTGAGTTTAGGCCAGAGAGGTTCTTGGTTCCCTCAAAAGAACAAGTGGATTTAGACCAAACTAAGGGGCAAAACTTCAATTTTGTCCCATTTGGGGGTGGAAGAAGAGGGTGTCCAGGGACTCTGTTGGCGTTTGCCATGATGAATACTACAGTAGCAGCTATAGTTCAATGCTTTGATTGGAAGCTTGGTGGAGATGGAGATGGTGGTAAGGTTGATATGCAGTCAGGACCAGGCCTGACCTTGAGCATGCTTCACCCACTCAAATGCCATCCTATAGTTCACTTTAACCCATTTGAGGGATAG 1548 0.4696 MGTFTDLQYYTIFFILSFISTLLLRSFLNRITTPTTRLRLPPSPPALPIIGHLRLHFLSSSIYKSFHSLSTQYGPLLYLHFGASRCLLVSSAAMAAEIFKTNDLAFASRPRLAFADKLPYGTSSFITAEYGDYWRFMKKLCVTELLGVKQLERSRVVRREELDCFLKKLVESGENGEAVDVRAEVMKLTNHSTCRVILSARCSEDNDEAERLIEMVTEWVELAVKMSFGDVFGPLKRLGFWIYGRKAVELTLRYDEILEKMLKEHEERGKREDKDLMDVLLEVYQDDKAGMKLTRTHIKAFILDLFMAGTNTSAESMQWTIAELINHPDVFKKVREEIDLAVGRTRLVEESDIPNLPYLQAVVKETLRLHPPAPVATRECRKNCKIGGFNIPEKTAVAINLYAIMRDPEIWDDPTEFRPERFLVPSKEQVDLDQTKGQNFNFVPFGGGRRGCPGTLLAFAMMNTTVAAIVQCFDWKLGGDGDGGKVDMQSGPGLTLSMLHPLKCHPIVHFNPFEG* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1435 515 FunFam Cytochrome P450 family protein 32 504 - -
Vvi13g1435 515 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 Gene3D Cytochrome P450 29 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 SUPERFAMILY Cytochrome P450 36 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vvi13g1435 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 502 - -
Vvi13g1435 515 Pfam Cytochrome P450 41 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi13g1435 515 CDD CYP93 74 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1435 Vvi-Chr13 23194012 23196764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1435 39 513 Cytochrome P450 AT2G42250 49.375 4.16e-162 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1435 K23814 - vvi:100247724 985.711