Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1399 ATGGCGTTGTGCGGGCGCATCAGATCTTCCGGCCTTCCTCTTCTCCAGAAGTTTCTGAAATCCGATTTGATCTCAGCTCATGGATCGGGCGTTCAACGATCCCTCCTTTGTCCTGCTCTCAGTTTTTCCGAGTTCTCAAGGAATTATGCCACTGCATCAGTAGCAAAGGAAGGGAAAGTTAAGGTACCTCTGGTTTTGTTTGGGGGAGCTGGAAACTATGCCTCTGCCTTGTACATTGCAGCAGTAAAAGCTAATGCATTGGACACTGTTGAGTCTGAGATTCTTGACTTTCTTGAAGCTTCAAAGAGAAGTGATAATTTTTCTCAGTTCATGAAGAACTTGTCAGTGTCTAGGGGTGTAAGAGTGAAGGCTTTAACTGCAATTTGTTCTGAAACTAAATTCTCAGATGTCACAAAGAACTTCTTGGTTGTTTTGGCTGAGACTGGAAGACTAAGGAATTTGGAAAGTATAGCCAAGAAATTTTTGGATTTGACCATGGCACACAAGGGAGAAGTTAGAGCTGTTGTTACAACTGTAATTGTTGGTGGATCTGTGTGCATGTACAAAACGTAA 573 0.4276 MALCGRIRSSGLPLLQKFLKSDLISAHGSGVQRSLLCPALSFSEFSRNYATASVAKEGKVKVPLVLFGGAGNYASALYIAAVKANALDTVESEILDFLEASKRSDNFSQFMKNLSVSRGVRVKALTAICSETKFSDVTKNFLVVLAETGRLRNLESIAKKFLDLTMAHKGEVRAVVTTVIVGGSVCMYKT* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1399 190 PANTHER ATP SYNTHASE DELTA CHAIN 44 180 IPR000711 GO:0015986|GO:0046933
Vvi13g1399 190 Pfam ATP synthase delta (OSCP) subunit 70 179 IPR000711 GO:0015986|GO:0046933
Vvi13g1399 190 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 68 171 IPR026015 -
Vvi13g1399 190 Gene3D - 68 162 IPR026015 -
Vvi13g1399 190 PRINTS ATP synthase delta subunit signature 69 88 IPR000711 GO:0015986|GO:0046933
Vvi13g1399 190 PRINTS ATP synthase delta subunit signature 150 164 IPR000711 GO:0015986|GO:0046933
Vvi13g1399 190 PRINTS ATP synthase delta subunit signature 139 150 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1399 109 180 Primary Pumps ATPases AT5G13450 52.778 1.56e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1399 K02137 - vvi:100241422 342.428