Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1365 ATGCCTTCTGCAGTGGACTCACTTGTTGGTTTTGGAATGATGCTGTACATGTTTGTGTTAGGCCTAGAATTAGATCCTAATGTACTTATTAAAAAACCAGAGCGTGAGGCTAAAGTGGCGTATGGGGGAATGATCTCCACATTCATCCTAGCCTACATCGTGACTCCATATCTGCATTATTCTCAGGTTCCAAGCACGGGGTTCAACCTCGCTCTCTCCATCACCGTCTCAGGCACTGCCTCTCCCTTACTCTCCCGGATAGTCACTGATCTCAAGATTGGCAAGTCAGACATTGGGCATCTTGTATCTGCAGCTGGAATTCACACTGACATGGTATCCACTCTTATCATTTCAGTGGGATTTATGATTCTTGACGCTGATAAAAGTCTCAGTATCCGTGATTCACACCGCATCCTTTTTACTTGTTGTACCCTGGTGATCCAAACAGTGTTTGCAGCCACTGTTTCTCCAGTTTTCTTTGCCTGGGTGAACCATGAGAACCCAGAAGGAAAACCAGTAAAAGGCTCACACTTAGTCGTAACCATTGGCTTCGTGGTAGTCATTTGCGTCTCATCAGCAGCCATATCAGGGTACAGTCCGATGATGAGTGCATATGTGACAGGTCTTGTTCTACCTAGGGAGGGAAGATTATCAAAGCTAATGATTAACAAGATTAACCACTTCTTAACCAAAATAATTTTTCCAATTTATGGCCTTTGGGTGTTCTGGGTAGCCGGTTTCCATGAGTTCCAACTCGGAAAATTAGGGACATGGGGAAGGTTGTTTTTGCTTATGGTGATAGCAATGCTCGGAAAAGTCATTGGAACAATTGCCTCTGGGGTGATGTTAGGGTTTCAATTGCCAGAATCTGTCGCAATTGGGTTGCTTCTCACTGTCAAGGGCCATTTTCATATGTTGTTAGCCACTACTGCCATTCAAGAAATCATAACAGCTTCAACGGGCCTGGTGATGATCCTCACCTCCATGCTCACCATCATCCACACTCCAAAGGTCATTGAGCACATCATCAAGCGGGCCAGAAAACACACACCAAGACATCGAAAGACACTGCAGTGGCTTGAACCATCAACCGAGCTCCGAATCATGATCTGCATCCGCGGCCCCCAGAATGTGTCTTCCACGATCAGACTCATTGAGATGTCCCAAGGCACACCGAATCTTGGTCTTGCAATATACGTAACTGACATGATCGAACTCACTGAGAAGGTAGCAGCCACGGCCGTGAATGGAGAAGGAATGAACACCTTGACAGTAATGAACAAGTCAGTAAGGCAGATGAGGGAGCAGATCACAGGTGAGATTGAGGCTTATATGGCGGAGAATGGAGAGGGTGTGACAATAAGGAGGATGATGGCCTTGTCCATGCTGACCAGAATGCATCAGGATATTTGTGTTTTGGCTAAGGATTTGATGGTTTCACTGATCATTTTGCCCTTTCATAAGAATCGGCGGGAGGATGGAAAGTTCGATGGAAGTGGCCTTTCTGGATTCCGAAATGTGAATCGTAAGGTTCTTCGGCATGCCCCATGCTCTGTGGGAATATTGGTGGACAGGGGGCTTGGGTCAACAAAACGGATGTCAAGATCATTTGAATCGCTAAATATTGCGGTCATTTTCATGGGTGGGAAAGATGATCGGGAAGCATTATCCTACTCCAGTTGTGTGGCACGGCACCCAGGAGTAAGGCTCACTGTCATCAGACTCTTGTTGGACACCAATGCAAACAACTCCAGTACAAGTGCTGGGAAAAAATGGTTCAAGCATACTGAGCAGGAAGAGGAGATGAAGTTGGACGATGAGTACTTCACTGAATTTTATGATAAACATGTTGCAGGAGGGAAAGTTGCTTACACTGAAAGACATCTGATAAATTCAGCAGCGGCATTATCCACACTCCAGTCATTAGACAAGCAGTATGCGCTGATCATTGTGGGGCGAGGTGGGGGAGTGAACTCAACATTAACAGTAGGTATGAGTGATTGGAGGGAGTCTCCTGAACTGGGTCCTATTGGGGATATTCTTTCTGCATCTGATTCACCTGTCACTGCATCTATTTTGATCATCCAACAGCACAGTATTAAAGGAGAAATAGATGGCCTAGATGACGATTTTTCAATAATGTAA 2145 0.455 MPSAVDSLVGFGMMLYMFVLGLELDPNVLIKKPEREAKVAYGGMISTFILAYIVTPYLHYSQVPSTGFNLALSITVSGTASPLLSRIVTDLKIGKSDIGHLVSAAGIHTDMVSTLIISVGFMILDADKSLSIRDSHRILFTCCTLVIQTVFAATVSPVFFAWVNHENPEGKPVKGSHLVVTIGFVVVICVSSAAISGYSPMMSAYVTGLVLPREGRLSKLMINKINHFLTKIIFPIYGLWVFWVAGFHEFQLGKLGTWGRLFLLMVIAMLGKVIGTIASGVMLGFQLPESVAIGLLLTVKGHFHMLLATTAIQEIITASTGLVMILTSMLTIIHTPKVIEHIIKRARKHTPRHRKTLQWLEPSTELRIMICIRGPQNVSSTIRLIEMSQGTPNLGLAIYVTDMIELTEKVAATAVNGEGMNTLTVMNKSVRQMREQITGEIEAYMAENGEGVTIRRMMALSMLTRMHQDICVLAKDLMVSLIILPFHKNRREDGKFDGSGLSGFRNVNRKVLRHAPCSVGILVDRGLGSTKRMSRSFESLNIAVIFMGGKDDREALSYSSCVARHPGVRLTVIRLLLDTNANNSSTSAGKKWFKHTEQEEEMKLDDEYFTEFYDKHVAGGKVAYTERHLINSAAALSTLQSLDKQYALIIVGRGGGVNSTLTVGMSDWRESPELGPIGDILSASDSPVTASILIIQQHSIKGEIDGLDDDFSIM* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1365 714 Gene3D - 394 668 - -
Vvi13g1365 714 Gene3D - 2 352 IPR038770 -
Vvi13g1365 714 PANTHER CATION/H + ANTIPORTER 5 699 - -
Vvi13g1365 714 Pfam Sodium/hydrogen exchanger family 8 336 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1365 Vvi-Chr13 22356493 22359293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1365 5 714 Antiporter Super Family AT3G52080 47.790 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1365 - - vvi:100255123 1236.86