Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1316 ATGGAAGTTGTTGGAGAGGCTCTTCTTTCCGCTGCCTTTGGCTCGTTGTTTGACAAGTTGGGTTCCTCTGATCTGATTAAGTTCGCACGGCAGGAGGATGTCCACACCGAGCTCGAGAAATGGGAGAAGGAGTTGCAGAGCATCCGGCAAGAGGTCAACGACGCGGAGGAGAAGCAGATCACACAGGAGGCTGTCAAATCATGGCTGTTCGATCTGAGGGTTTTGGCGTATGATATGGATGACATCTTGGACGAGTTTGCTTACGAATTGATGAGGACAAAGCTGATGGGGGCTGAAGCTGATGAAGCCAGCACAAGCAAGAAACGCAAGTTCATTCCTACCTTCTCTACTAGTTTCAGTCCAACTCATGTTGTGCGTGATGTTAAGTTGGGGTCCAAGATTAGAGAGATCACCAGCAGATTACAACATATTTCAGCTAGAAAAGCTGGACTTGGACTGGAAAAGGCGGCAGGAGGAGCTACTTCTGCTTGGCAAAGGCCACCACCCACTACACCTATAGCATACGAACCTGGGGTTTATGGCAGGGATGAAGATAAAAAAGTGCTTCTTGATTTGCTGCACAAGGTTGAGCCCAATGAAACCAATGTTGGCGTCATTTCCATTGTTGGCATGGGCTGGCTGGGCAAGACAACGCTTGCACGGCTGGTTTACAATGATGAAATGGCCAAAAATTTTGATCTAAAAGCGTGGGTTTGTGTATCTGATGTGTTCGATGTGGAGAATATAACAAAAGCAATTCTCAATTCGGTGGAAAGTTCTGATGCAAGTGGCTCGTTGGACTTCCAACAAGTTCAAAAGAAATTAGCAGACGCATTGACAGGGAAAAAGTTTTTACTCATTCTAGACGATGTGTGGAACGAAGATTCTGGTAATTGGAACAGCTTGCGCGCCCCTTTTAGTGTAGGGGCAAAAGGAAGCAAAGTCATGGTCACAACACGCAATAAAGGAGTTGCATTGATGATGGGAGCTGAGAAGAATGTTTATGAACTAAAAACTTTATCAGAAGATGCCTGCTGGTCAGTGTTTGAGAAGCATGCGTTTGAACATAGAAATATCGATGAACATCCAAACCTGGTGTCTATTGGTAGGAAAATTGTCAACAAGTGTGGCGGATTGCCACTGGCGGCAACAACGCTTGGTGGCCTTTTACGCTCTAAACGAAGGGAAGATGAATGGGAAAAAATATTAAGTAGTAAAATATGGGGATGGTCAGGCACAGAACCTGAGATTCTCCCTGCGTTGCGATTGAGTTATCACTATCTCCCTTCACATTTGAAGAGGTGTTTTGCTTACTGTGCAATGTTCCCCAAGGACTATGAGTTCGACTCCAAAAATTTGGTCCTTCTGTGGATGGCCGAAGGTTTGATTCAACAACCAAAAGGTGGTAGACATACAATGGAAGATTTAGGCGATGACTATTTTTGCGAGTTATTGTCAAGATCATTCTTTCAATCATCGAGTAATCATGAATCACATTTTGTGATGCATGATCTTATTCATGACCTAGCTCAAGGTGTTGCTGGAGAAATATGTTTTTGTTTGGAAGATGAGTTGGAGTGTAACCGGCAATCCACAATTTCCAAAGAGACTCGTCATTCATCATTTGTTCGTAGAGATGGGGATGTGCTAAAAAAATTTGAAGCTTTTCAAGAGGTAAAGCATTTACGGACATTTGTTGCTTTAAATATTCATTGGGCGTCTACAAAATCTTATGTAACTAGTTTGGTGTGTAATCATCTAGTGCCAAAATTTCAACGACTAAGAGTTCTCTCTCTGAGTCAATACAATATTTTTGAGCTACCAGATTCTATTTGTGAATTGAAACATCTACGCTATTTGAATCTGTCCTACACCAAAATAAGATCTTTGCCTGACTCAGTGGGCAATCTCTATAATTTACAAACATTGATGTTATCCTTTTGTATGCATCTTACGAGGTTACCTCCCAACATTGGAAACTTAATTAATCTTCGACATCTCAGTGTTGTTGGATGTTCATTGCAAGAGATGCCACAACAAATAGGCAAATTAAAGAACCTGCAAACATTGTCTGATTTTATTGTGGGCAAAAGTGGATTTTTGGGAATAAAGGAGTTGAAGCATTTATCACATCTCCGAGGGAAGATTCGTATTTCACAATTGAAAAATGTGGTGAATATTCAAGATGCCATAGATGCCAATCTAAGGACTAAGCTCAATGTTGAAGAGTTGATTATGCATTGGAGTAAAGAGTTCGATGATTTGCGAAATGAAGACACCAAAATGGAAGTCCTCCTCTCTCTACAACCTCATACTAGTTTGAAGAAACTCAATATTGAAGGCTTCGGTGGTCGGCAATTCCCCAACTGGATATGTGATCCCTCTTACTCTAAATTGGCGGAGTTAAGTCTCTATGGTTGTATAAGGTGCACATCACTGCCTTCAGTTGGGCAACTACCCTTCCTAAAGAGGTTGTTCATCGAAGGAATGGATGGAGTGAGAAGAGTGGGGCTGGAGTTTGAGGGGCAGGTTTCTCTTTATGCTAAGCCTTTCCAATGCTTGGAGTCTTTATGTTTTGAAAATATGAAGGAATGGAAAGAGTGGTCATGGTCAAGAGAGTCATTCTCTCGCCTCCTCCAGTTGGAGATAAAAGATTGTCCAAGACTGAGTAAGAAATTACCCACTCACCTAACTTCTCTAGTAAGACTTGAAATTAACAATTGCCCAGAAACGATGGTTCCACTTCCAACACATCTGCCTTCTCTTAAAGAGCTCAATATTTATTATTGCCCAAAAATGATGCCTCTATGGTCCTCTTTTGCATTTGACCCTTTTATATCAGTGAAGAGAGGGAGTAGAAGTGCAACTGACATCACCTCAGGTATTTATTTAAGAATTAATGGAATGTCAGGGCTTTCTAGACTCGAGCAAAAGTTTTTGCGGTCTTTGCCAAGGCTTCAACTTCTGGAAATTGACAATTCTGGTGCTCTGGAATGTTTGTGGGAAAATGGGTTGGGATTAGGAAACCTTGCTAGTCTTCGAGTATCGGGTTGTAACCAACTTGTATCCTTGGGAGAGGAGGAAGTGCAAGGGCTGCCTTGCAATATTCAATATTTGGAGATATGTAAGTGTGATAACTTGGAGAAGCTTCCACATGGATTACAAAGCTATGCATCTCTTACAGAGTTGATTATCAAGGATTGTTCAAAATTGGTGTCATTTCCAGACAAGGGTTTCCCGCTCATGCTTAGACGTCTTACTATTTCTAATTGTCAGAGTCTAAGTAGCCTACCTGATAGCAGTAATTGCTGCAGCAGCGTGTGTGCCCTTGAATACTTGAAAATAGAGGAGTGTCCTTCTCTCATTTGCTTTCCAAAAGGGCAGTTACCCACCACCCTTAAGGAACTGTATGTATCCGTTTGTAAAAATCTGAAGTCTCTTCCAGAAGACATCGAGGTTTGTGCCCTTGAACACATAGATATAAGGTGGTGTTCGTCTCTCATTGGTTTTCCAAAAGGAAAGCTACCATCAACTCTCAAGAATCTCACGATAGGAGGGTGTAAAAAGCTAGAGTCTTTACCAGAGGGAATAATGCATCACCATTCCAACCACACAACCAATTGTGGTCTTCAATTCTTGGATATCTCGAAATGTCCATCTCTCACATCCTTCCCTAGAGGCAGATTTCTCTCTACCCTTAAATCTATAAGGATTTGTGATTGTGCACAGCTGCAGCCAATTTTGGAGGAGATGTTTCACCGCAATAATAATGCACTTGAAGTTTTGTCCATCTGGGGATATCCCAATCTCAAAACTATACCAGATTGCCTCTACAACCTCAAACATCTTCAGATCAGAAAATGTGAGAATCTGGAGTTGCAGCCTTGTCAATTGCAAAGCCTCACTTCTCTCACATCACTTGAGATGACTGATTGTGAGAATATCAAGACCATACCAGATTGCTTCTACAACCTCAGAGATCTTCGGATCTATAAATGTGAGAATCTGGAGTTGCAGCCTCATCAATTGCAAAGCCTCACTTCTCTTGCAACACTCGAGATCATTAATTGTGAGAATATCAAGACACCCTTATCAGAATGGGGCCTTGCCAGATTGACCTCCCTTAAAACTCTCATCATTTCTGATTATCACCACCACCACCACCACCACCACCCATTCCTTCTTCCTACTACTGTAGTTGAGCTTTGCATTTCAAGCTTCAAGAATCTGGACTCCTTGGCCTTCCTATCTCTCCAAAGGCTCACCTCTCTTAAAAGTCTATGTATCTCCCGATGTCCTAATCTCCAGTCGTTTTTGCCAACGGAAGGGCTGTCTGACACGCTTTCAGAACTATCTATAAATGGTTGCCCACTCCTGATTCAAAGGTGCTTAAAAGAGAAAGGGGAAGATTGGCCTAAGATTGCCCACATCCCCTATGTGAAAATAGATGGCCAATTGATCTTTGAGCAATAA 4473 0.4203 MEVVGEALLSAAFGSLFDKLGSSDLIKFARQEDVHTELEKWEKELQSIRQEVNDAEEKQITQEAVKSWLFDLRVLAYDMDDILDEFAYELMRTKLMGAEADEASTSKKRKFIPTFSTSFSPTHVVRDVKLGSKIREITSRLQHISARKAGLGLEKAAGGATSAWQRPPPTTPIAYEPGVYGRDEDKKVLLDLLHKVEPNETNVGVISIVGMGWLGKTTLARLVYNDEMAKNFDLKAWVCVSDVFDVENITKAILNSVESSDASGSLDFQQVQKKLADALTGKKFLLILDDVWNEDSGNWNSLRAPFSVGAKGSKVMVTTRNKGVALMMGAEKNVYELKTLSEDACWSVFEKHAFEHRNIDEHPNLVSIGRKIVNKCGGLPLAATTLGGLLRSKRREDEWEKILSSKIWGWSGTEPEILPALRLSYHYLPSHLKRCFAYCAMFPKDYEFDSKNLVLLWMAEGLIQQPKGGRHTMEDLGDDYFCELLSRSFFQSSSNHESHFVMHDLIHDLAQGVAGEICFCLEDELECNRQSTISKETRHSSFVRRDGDVLKKFEAFQEVKHLRTFVALNIHWASTKSYVTSLVCNHLVPKFQRLRVLSLSQYNIFELPDSICELKHLRYLNLSYTKIRSLPDSVGNLYNLQTLMLSFCMHLTRLPPNIGNLINLRHLSVVGCSLQEMPQQIGKLKNLQTLSDFIVGKSGFLGIKELKHLSHLRGKIRISQLKNVVNIQDAIDANLRTKLNVEELIMHWSKEFDDLRNEDTKMEVLLSLQPHTSLKKLNIEGFGGRQFPNWICDPSYSKLAELSLYGCIRCTSLPSVGQLPFLKRLFIEGMDGVRRVGLEFEGQVSLYAKPFQCLESLCFENMKEWKEWSWSRESFSRLLQLEIKDCPRLSKKLPTHLTSLVRLEINNCPETMVPLPTHLPSLKELNIYYCPKMMPLWSSFAFDPFISVKRGSRSATDITSGIYLRINGMSGLSRLEQKFLRSLPRLQLLEIDNSGALECLWENGLGLGNLASLRVSGCNQLVSLGEEEVQGLPCNIQYLEICKCDNLEKLPHGLQSYASLTELIIKDCSKLVSFPDKGFPLMLRRLTISNCQSLSSLPDSSNCCSSVCALEYLKIEECPSLICFPKGQLPTTLKELYVSVCKNLKSLPEDIEVCALEHIDIRWCSSLIGFPKGKLPSTLKNLTIGGCKKLESLPEGIMHHHSNHTTNCGLQFLDISKCPSLTSFPRGRFLSTLKSIRICDCAQLQPILEEMFHRNNNALEVLSIWGYPNLKTIPDCLYNLKHLQIRKCENLELQPCQLQSLTSLTSLEMTDCENIKTIPDCFYNLRDLRIYKCENLELQPHQLQSLTSLATLEIINCENIKTPLSEWGLARLTSLKTLIISDYHHHHHHHHPFLLPTTVVELCISSFKNLDSLAFLSLQRLTSLKSLCISRCPNLQSFLPTEGLSDTLSELSINGCPLLIQRCLKEKGEDWPKIAHIPYVKIDGQLIFEQ* 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1316 1490 Gene3D Ribonuclease Inhibitor 1326 1469 IPR032675 -
Vvi13g1316 1490 Gene3D Ribonuclease Inhibitor 1173 1325 IPR032675 -
Vvi13g1316 1490 Gene3D - 424 512 IPR036388 -
Vvi13g1316 1490 Gene3D - 339 423 IPR042197 -
Vvi13g1316 1490 SUPERFAMILY L domain-like 501 937 - -
Vvi13g1316 1490 Gene3D - 169 336 IPR027417 -
Vvi13g1316 1490 Gene3D - 11 128 - -
Vvi13g1316 1490 CDD RX-CC_like 11 145 IPR038005 -
Vvi13g1316 1490 FunFam Probable disease resistance protein At1g61300 164 333 - -
Vvi13g1316 1490 Coils Coil 31 58 - -
Vvi13g1316 1490 FunFam Probable disease resistance protein At1g63360 425 511 - -
Vvi13g1316 1490 PRINTS Disease resistance protein signature 376 390 - -
Vvi13g1316 1490 PRINTS Disease resistance protein signature 278 292 - -
Vvi13g1316 1490 PRINTS Disease resistance protein signature 635 651 - -
Vvi13g1316 1490 PRINTS Disease resistance protein signature 205 220 - -
Vvi13g1316 1490 SUPERFAMILY L domain-like 964 1196 - -
Vvi13g1316 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 439 IPR027417 -
Vvi13g1316 1490 Pfam Leucine rich repeat 593 648 IPR001611 GO:0005515
Vvi13g1316 1490 SMART LRR_typ_2 614 637 IPR003591 -
Vvi13g1316 1490 SMART LRR_typ_2 661 684 IPR003591 -
Vvi13g1316 1490 Pfam NB-ARC domain 199 404 IPR002182 GO:0043531
Vvi13g1316 1490 SUPERFAMILY L domain-like 1209 1475 - -
Vvi13g1316 1490 Gene3D Ribonuclease Inhibitor 550 939 IPR032675 -
Vvi13g1316 1490 ProSiteProfiles Leucine-rich repeat profile. 616 637 IPR001611 GO:0005515
Vvi13g1316 1490 Gene3D Ribonuclease Inhibitor 940 1162 IPR032675 -
Vvi13g1316 1490 PANTHER DISEASE RESISTANCE PROTEIN RP 34 886 IPR044974 GO:0006952
Vvi13g1316 1490 Pfam Rx N-terminal domain 9 104 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1316 Vvi-Chr13 21602815 21607287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1316 178 829 WRKY Transcription Factor Family AT5G45050 23.994 9.91e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1316 - - vvi:100265437 2518.42