Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1305 ATGTGTGGAATATTCGCCTACTTGAACTACAGCGTCAACAGAGAGAGGCGCTACATTCTCGAAGTCCTCTTCAATGGCTTGAGGCGTTTGGAGTACAGAGGCTACGATTCCGCCGGAATCTCAATTGATTCTTCACTTTCTCTTGATGCAGACACTCTCTCTTCCACACCCCTCGTTTTCCGCCAGGAAGGCAACATCGAATCTCTCGTCAAGTCCGTCTACGAAGAGGTTGCTGAAACTGATCTAAATTTGGAGGAGTCATTTTTTGTACATGCTGGAATAGCACACACTCGGTGGGCGACCCATGGGGAGCCTGCTCCAAGGAATAGTCATCCTCAAACCTCTGGCCCTGGAAATGAATTCTTAGTTGTTCATAATGGTGTTGTTACTAATTATGAGGTATTAAAGGAAACTCTAGTTCGACATGGATTCACTTTTGAATCTGAAACTGACACTGAAGTAATTCCAAAGCTTGCGAAATTTGTTTTTGACAAAGCAAATGAAGAAGGTGACCAGACTGTCACATTTAGTCAAGTTGTCCTTGAAGTTATGCGGCATCTTGAAGGAGCCTATGCTCTCATTTTCAAAAGTCGGCATTATCCAAATGAATTGATTGCCTGCAAACGTGGTAGTCCATTGCTTCTTGGGGTCAAAGAACTAACTGAAGATTTCGGTGTTGAAGCCTCATTTCATGATGCTAAATTCCTTTCAAAGGATGGCAAGCCCAAAGAGTTCTTCTTATCCAGCGACGCCAATGCTGTAGTTGAACACACAAAACAAGTTTTGGTGATTGAGGATGGTGAAGTGGTTCATCTTAAGGATGGATGTGTGTCAATCCTCAAGTTTGACAATTCCAAGGGAAAACATAGCGGTGCTCTTTCTAGACCTTCTTCTGTGCAACGTGCATTATCCATTCTTGAGATGGAGGTTGAGCAAATAAATAAAGGAAGTTATGAGCATTATATGCAGAAAGAGATCCATGAACAACCTGAGTCTTTAACAACAACGATGCGGGGAAGGCTTATACGTGGAGGTTCGTCGAAATCCAAGACTGTTCTTTTGGGTGGGCTGAAGGATCACCTGAAAACTATTAGGAGAAGCAGGAGAATTGTTTTTATTGGTTGTGGCACAAGTTATAATGCTGCTTTAGCTGCAAGACCCATTTTGGAAGAACTTTCAGGTATTCCTGTTACAATGGAAGTTGCTAGTGATCTGTTGGATAGGCAGGGGCCAATATACAGAGAAGATACAGCAGTTTTTGTTAGTCAGTCTGGTGAAACTGCAGATACTTTACACGCTTTGGAATATGCTTTAGAAAATGGTGCACTATGTGTTGGTATAACGAATACTGTTGGTAGTGCTATAGCAAGGAATACACACTGTGGTGTTCACATAAATGCTGGCTGTGAAATAGGTGTAGCAAGTACCAAGGCCTACACAAGTCAAATAGTAGTAATGGCTATGTTAGCTCTGGCAATTGGAGATGACACAAGTTCTAGTCTAGGAAGGAGAGAGTCTATAATAGACGGTTTATTTGACTTGCCAAATAAAGTCAGAGAGGTTTTGAAGCTTGACCAGGAAATGAAGGATCTTGCAAAACTATTGATTGCTGAGCAGTCCCTTCTTGTGTTTGGAAGAGGTTACAACTACGCAACAGCTCTTGAGGGTGCTTTGAAAGTAAAGGAAGTGGCACTTATGCACAGTGAAGGAATAATTGCAGGTGAAATGAAACATGGTCCTTTGGCTCTAGTTGATGAAAATCTTCCAATTGTTGTTATTGCTACCCGTGATGCTTGCTTCAGCAAGCAGCAGTCAGTTATCCAGCAACTTCATGCTCGCAAAGGTCGCTTGATAATGATGTGTTCGAAAGGAGATTCAGCAGCTGTGTGTCCTGGTGGATCTTGCCGAGTTATTGAGGTTCCACAGGTTGAGGACTGTCTTCAGCCTGTAATTAATGTGGTTCCACTGCAGTTGTTGGCATATCATCTTACTGTCCTACGTGGTTACAACGTCGACCAACCTCGGAATCTTGCAAAGAGTGTGACTACCCAATGA 2055 0.4273 MCGIFAYLNYSVNRERRYILEVLFNGLRRLEYRGYDSAGISIDSSLSLDADTLSSTPLVFRQEGNIESLVKSVYEEVAETDLNLEESFFVHAGIAHTRWATHGEPAPRNSHPQTSGPGNEFLVVHNGVVTNYEVLKETLVRHGFTFESETDTEVIPKLAKFVFDKANEEGDQTVTFSQVVLEVMRHLEGAYALIFKSRHYPNELIACKRGSPLLLGVKELTEDFGVEASFHDAKFLSKDGKPKEFFLSSDANAVVEHTKQVLVIEDGEVVHLKDGCVSILKFDNSKGKHSGALSRPSSVQRALSILEMEVEQINKGSYEHYMQKEIHEQPESLTTTMRGRLIRGGSSKSKTVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGIPVTMEVASDLLDRQGPIYREDTAVFVSQSGETADTLHALEYALENGALCVGITNTVGSAIARNTHCGVHINAGCEIGVASTKAYTSQIVVMAMLALAIGDDTSSSLGRRESIIDGLFDLPNKVREVLKLDQEMKDLAKLLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGIIAGEMKHGPLALVDENLPIVVIATRDACFSKQQSVIQQLHARKGRLIMMCSKGDSAAVCPGGSCRVIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGYNVDQPRNLAKSVTTQ* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1305 684 Pfam SIS domain 535 666 IPR001347 GO:0097367|GO:1901135
Vvi13g1305 684 Pfam SIS domain 364 491 IPR001347 GO:0097367|GO:1901135
Vvi13g1305 684 Pfam Glutamine amidotransferase domain 92 206 - -
Vvi13g1305 684 SUPERFAMILY SIS domain 315 683 IPR046348 GO:0097367|GO:1901135
Vvi13g1305 684 ProSiteProfiles SIS domain profile. 360 499 IPR001347 GO:0097367|GO:1901135
Vvi13g1305 684 ProSiteProfiles SIS domain profile. 531 674 IPR001347 GO:0097367|GO:1901135
Vvi13g1305 684 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 684 - -
Vvi13g1305 684 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 316 538 - -
Vvi13g1305 684 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 281 IPR029055 -
Vvi13g1305 684 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 275 IPR017932 -
Vvi13g1305 684 CDD SIS_GlmS_GlmD_2 526 682 IPR035490 -
Vvi13g1305 684 CDD SIS_GlmS_GlmD_1 369 494 IPR035466 -
Vvi13g1305 684 Gene3D - 316 683 - -
Vvi13g1305 684 CDD GFAT 2 272 IPR047084 -
Vvi13g1305 684 Gene3D - 520 669 - -
Vvi13g1305 684 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 294 IPR029055 -
Vvi13g1305 684 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 2 295 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1305 27 216 PRT Gene Family AT2G16570 26.289 1.22e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1305 K00820 - vvi:100249999 1319.68