Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1302 ATGGTTTGCATACGCAAAGCGACTATCGACGACCTCCTTGCAATGCAAGCTTGCAATCTCCTCTGCCTCCCAGAGAACTACCAGATGAAGTACTACCTCTACCACATCCTCTCGTGGCCACAGCTCCTCTACGTCGCCGAAGATTACAACGGCCGCATCGTCGGCTACGTGCTCGCTAAGATGGAGGAGGAAAGCTCCGAGTGCCACGGCCACATCACCTCCCTTGCCGTGCTCCGGACGCACCGCAAACTCGGCTTGGCCACCAAGCTTATGACTGCCGCGCAAAACGCCATGGAGCAGGTGTTCGGGGCCGAGTACGTCTCGCTACATGTGCGGAAGAGTAATAGGGCAGCGTTCAATTTGTATACGGAGACCCTGGGCTATAAGATTCATGATGTGGAGGCGAAATATTATGCGGATGGTGAGGATGCGTATGATATGAGGAAGCAGCTTAAAGGAAAGCAAGTTGGCCACCACCATCATCATCATCATCACCATCACCACCATCACGGAGGTGGATGTTGCGGTGGAGAACCGAAGCTCGTGGAGACGAAGGGGGAGGCAAAGGCTGAGGCGAAAGCAGAGTGA 588 0.5459 MVCIRKATIDDLLAMQACNLLCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESSECHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQVGHHHHHHHHHHHHHGGGCCGGEPKLVETKGEAKAEAKAE* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1302 195 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Vvi13g1302 195 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
Vvi13g1302 195 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 169 IPR045047 GO:0004596|GO:0006474|GO:0031415
Vvi13g1302 195 MobiDBLite consensus disorder prediction 153 171 - -
Vvi13g1302 195 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Vvi13g1302 195 CDD NAT_SF 43 110 - -
Vvi13g1302 195 Gene3D - 2 173 - -
Vvi13g1302 195 FunFam N-alpha-acetyltransferase daf-31-like 2 174 - -
Vvi13g1302 195 MobiDBLite consensus disorder prediction 152 180 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vvi13g1302 Acetyltransf_1 4.4e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1302 K20791 - vvi:100265457 344.354