Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1296 ATGCCTTTGGGAAGAGCACTTGAATCTGCTTCTGTGAATGTGCTTCTTAACAAGTTGGCTTCCCAACAATTCATCGATTTCTTCTTTAAATGGAAACTTGATACTGGGTTGTTGACCAAACTACAGACAACACTGCAAGTGATCTATGCAGTTCTAGATGATGCTGAGGAGAAGCAAGCTGAAAATGATCCACATGTCAAGAATTGGCTCGACAAGGTTAGGGATGCAGCTTATGATGCTGAGGACATACTGGAAGAGATCGCTATCGATGCACTTGAATCGCGTAACAAGGTACCAAACTTTATTTATGAGTCGTTGAATTTGAGCCAAGAAGTTAAGGAAGGAATTGATTTTAAGAAGAAGGATATTGCTGCTGCTCTTAATCCATTTGGTGAACGTATTGATTCGAAAATGAGAAATATTGTGGAAAGACTTGAAGATATTGTGAAGCAAAAAGATATTCTTCGATTGAGAGAGAATACAAGAGGGATAGTGTCTGGAATTGAGAAGAGATTGACAACTCCCTTGGTGAATGAAGAACATGTTTTTGGATCACCTATTTATGGTAGAGATGGCGATAAAGAGGAGATGATTAAACTGTTGACTTCGTGTGAGGAAAATAGTGATGAGATTCGTGTGATTCCCATTGTTGGTATGGGAGGTCTTGGCAAAACCACGCTTGCTCAGATTGTCTACAATGATGAACGAGTGAAGAAACATTTTCAGTTGAAAGCATGGGCTTGTGTCTCTGATGAATTTGAAGTGAAGAGGATAACAAAAGCACTGGTGGAGTCTGCCACTAAAAGGACTTGTGGTTTGAACAATTTGGAACTGCTTCAAAGTGAATTAAGAAAGATGTTGAACAGACGAAAATTTTTACTTGTTTTGGATGATGTGTGGAACGAGGATTATGGGGATTGGGACAAACTGCGGATTCCTCTGGCAGTTGGATCACCGGGTAGTAAAATCATAGTCACAACTCGGAGTGAAAGAGTTGCCTCGATTATGCGCCCTGGAAAAACATACCCTCTCAAGGGGTTGTCTAGTGATGATTGTTGGTCATTGTTAGAGCAAATTGCCTTTCCAAATGGAAACTCATACGCATTTCCTGAGCTGAAGGTCATTGCAGAGGGAGTGGCGAGGAAGTGTAAAGGCTTGCCTTTAGCAGCAAAGTCACTTGGGGGTCTCTTACGCTCTAATCCAAACGAGAATTACTGGAAGGATATTCTGAACAGCAAGATCTGGGATTTTTCAAACAATGGCATTATTCCACCCCTGAGGTTAAGCTACCATCACCTCCCTCCACATTTGAAGCAATGTTTTGTCTACTGTGCAGTGTTTCCCAAGGACTTTGAATTCGACATTGAGATGTTAGTCTTGTTATGGATAGCTGAGGGTTTTGTGCAGCAGCCAGAGGGGGGAAAAGAAATGGAAGCTATGGCCCGCAGCTACTTCTTTGATCTACTATCAAGGTCATTCTTTCAACAATCTAGTGTCGACAAATCACAGTATCTAATGCATGACCTTATCCATGATCTAGCTCAGTTTATTTCTGGAAAAGAATTTCTCAGTCAACAAGCACTGTCTACGCTACTGCTAAAATGTCGTCATCTTATTAAGCTGCCAATGGACTTGAAGAATGTGACTAATTTACGACACCTCAATATTGAGACGAGTGGCTTGCAATTGATGCCTGTTGATATGGGAAAACTGACAAGCCTCCAAACATTGTCTAATTTTGTTGTGGGCAAAGGTAGGGGGTCAGGAATAGGACAGCTTAAAAGCTTATCAAATCTCAGGGGAAAACTCTCCATTTCAGGGTTGCAAAATGTTGTCAATGTCAGGGATGCTATTGAGGCCAAGTTAGAGGATAAGGAGTACCTTGAAAAGCTAGTTTTAGAATGGATTGGCATATTTGATGGTACAAGAGATGAGAAAGTGGAAAATGAGATACTTGACATGCTACAACCTCATGAGAACTTGAAAAATCTCTCTATTGAATACTATGGTGGTACAGAATTTCCAAGTTGGGTGGGAGATCCATCCTTCAGTAAGATGGAGTACCTGAATCTCAAGGGTTGCAAAAAATGTATATCCTTACCATCACTTGGCCAACTACCATTGCTTAAGGAGTTAATCATTGAAGGAATGGATGGTATAAAGCATGTTGGTCCTCAGTTTTATGGGGATGATTACTCTTCAATTGATCCTTTTCAATCATTGGAGACGCTGAAGTTTGAGAATATTGAAGAATGGGAGGAATGGTCTTCTTTTGGAGATGGAGGAGTTGAAGGATTCCCTTGCCTTCGTGAGCTTTCTATATTTAAATGTCCAAAGTTGACAAGGTTCTCACACCGATTTTCTTCCTTAGAAAAACTTTGTATTGAACGGTGTCAAGAACTGGCTGCTTTTTCAAGGCTTCCTTCACCTGAAAACTTGGAGTCTGAAGATTTTCCTCGCCTTCGTGTGCTCAGACTAGTACGTTGCCCCAAGTTGAGTAAACTACCGAATTACCTTCCATCATTGGAAGGAGTTTGGATAGATGATTGTGAGAAATTGGCTGTACTACCAAAGCTTGTGAAGCTCTTGAATTTGGACTTGTTGGGTTCTAATGTGGAGATTCTTGGAACTATGGTTGATCTTAGGTCACTAACCTTTTTGCAGATAAATCAAATTTCAACACTCAAAATTTTTCCTGAAGGTTTCATGCAACAGTCTGCAAAACTTGAAGAACTAAAGATTGTTAATTGTGGTGATCTTGTAGCTTTGTCGAATCAGCAGTTGGGATTAGCACACCTTGCTTCTCTTAGACGCTTGACAATCTCTGGGTGTCCTAAACTTGTTGCTTTGCCAGATGAAGTGAACAAGATGCCTCCTAGACTAGAATCTTTGGATATAAAAGACTGTCATAACCTGGAGAAACTGCCAGATGAACTTTTCAAGCTCGAGTCTCTTAGTGAGTTGCGAGTGGAAGGGTGTCAAAAACTTGAGTCCTTTCCTGATATGGGATTGCCATCCAAGCTTAAACGTCTCGTGATCCAAAACTGTGGTGCAATGAAGGCCATTCAAGATGGAAATTTACGCAGCAACACCTCTCTTGAGTTTCTGGAGATCCGTTCATGTTCTTCCCTTGTGTCAGTTCTTGAAGGAGGCATTCCCACCACACTCAAATATATGAGGATTTCTTACTGCAAAAGTCTGAAGTCGCTGCCTGTGGAGATGATGAACAATGACATGTCTCTTGAGTACTTGGAGATAGAAGCTTGTGCTTCACTTTTGTCCTTTCCAGTGGGTGAGTTACCCAAATCTCTTAAGCGTCTTGAGATTAGTATTTGTGGTAATTTCCTTTCATTACCTTCAAGCCTTCTGAACCTAGTGCATCTTGATTTCTTACACCTAGAAAATTGCCCTCTTCTTGAGTATTTTCCAAATACTGGGTTGCCTACCCCTAACCTAAGAAAGCTCACTATTGCTACGTGTAAGAAGCTCAAGTTCTTGCCCAATCGATTTCACAACCTCAAATCTCTTCAAAAATTGGCCTTATCTCGTTGTCCAAGTCTTGTATCCCTACCAAAACAGGGGTTGCCCACCAACCTAATATCACTTGAGATTACTCGTTGTGAGAAACTCAATCCCATTGATGAGTGGAAGCTGCACAAACTTACCACTCTTAGAACTTTCTTGTTTGAGGGAATCCCAGGTCTGGTGTCGTTTTCAAATACTTATCTTCTTCCTGACTCCATAACCTTTCTTCACATCCAAGAACTCCCAGACCTCCTATCAATATCAGAAGGGCTGCAAAATCTCACCTCACTTGAAACTCTGAAGATTAGAGACTGCCATAAGCTCCAAGCTTTGCCAAAGGAGGGGCTTCCAGCCACACTTTCTTCTCTAACAATTAAGAACTGCCCTCTGATACAATCACGCTGTAAACAGGACACTGGAGAGGATTGGTCCAAAATTATGGACATTCCTAATGTAGATCTATTTTAA 3993 0.411 MPLGRALESASVNVLLNKLASQQFIDFFFKWKLDTGLLTKLQTTLQVIYAVLDDAEEKQAENDPHVKNWLDKVRDAAYDAEDILEEIAIDALESRNKVPNFIYESLNLSQEVKEGIDFKKKDIAAALNPFGERIDSKMRNIVERLEDIVKQKDILRLRENTRGIVSGIEKRLTTPLVNEEHVFGSPIYGRDGDKEEMIKLLTSCEENSDEIRVIPIVGMGGLGKTTLAQIVYNDERVKKHFQLKAWACVSDEFEVKRITKALVESATKRTCGLNNLELLQSELRKMLNRRKFLLVLDDVWNEDYGDWDKLRIPLAVGSPGSKIIVTTRSERVASIMRPGKTYPLKGLSSDDCWSLLEQIAFPNGNSYAFPELKVIAEGVARKCKGLPLAAKSLGGLLRSNPNENYWKDILNSKIWDFSNNGIIPPLRLSYHHLPPHLKQCFVYCAVFPKDFEFDIEMLVLLWIAEGFVQQPEGGKEMEAMARSYFFDLLSRSFFQQSSVDKSQYLMHDLIHDLAQFISGKEFLSQQALSTLLLKCRHLIKLPMDLKNVTNLRHLNIETSGLQLMPVDMGKLTSLQTLSNFVVGKGRGSGIGQLKSLSNLRGKLSISGLQNVVNVRDAIEAKLEDKEYLEKLVLEWIGIFDGTRDEKVENEILDMLQPHENLKNLSIEYYGGTEFPSWVGDPSFSKMEYLNLKGCKKCISLPSLGQLPLLKELIIEGMDGIKHVGPQFYGDDYSSIDPFQSLETLKFENIEEWEEWSSFGDGGVEGFPCLRELSIFKCPKLTRFSHRFSSLEKLCIERCQELAAFSRLPSPENLESEDFPRLRVLRLVRCPKLSKLPNYLPSLEGVWIDDCEKLAVLPKLVKLLNLDLLGSNVEILGTMVDLRSLTFLQINQISTLKIFPEGFMQQSAKLEELKIVNCGDLVALSNQQLGLAHLASLRRLTISGCPKLVALPDEVNKMPPRLESLDIKDCHNLEKLPDELFKLESLSELRVEGCQKLESFPDMGLPSKLKRLVIQNCGAMKAIQDGNLRSNTSLEFLEIRSCSSLVSVLEGGIPTTLKYMRISYCKSLKSLPVEMMNNDMSLEYLEIEACASLLSFPVGELPKSLKRLEISICGNFLSLPSSLLNLVHLDFLHLENCPLLEYFPNTGLPTPNLRKLTIATCKKLKFLPNRFHNLKSLQKLALSRCPSLVSLPKQGLPTNLISLEITRCEKLNPIDEWKLHKLTTLRTFLFEGIPGLVSFSNTYLLPDSITFLHIQELPDLLSISEGLQNLTSLETLKIRDCHKLQALPKEGLPATLSSLTIKNCPLIQSRCKQDTGEDWSKIMDIPNVDLF* 1331
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1296 1330 SUPERFAMILY L domain-like 1031 1320 - -
Vvi13g1296 1330 PRINTS Disease resistance protein signature 213 228 - -
Vvi13g1296 1330 PRINTS Disease resistance protein signature 383 397 - -
Vvi13g1296 1330 PRINTS Disease resistance protein signature 931 947 - -
Vvi13g1296 1330 PRINTS Disease resistance protein signature 286 300 - -
Vvi13g1296 1330 Pfam Rx N-terminal domain 10 96 IPR041118 -
Vvi13g1296 1330 Gene3D - 430 514 IPR036388 -
Vvi13g1296 1330 Gene3D - 11 117 - -
Vvi13g1296 1330 Pfam NB-ARC domain 194 411 IPR002182 GO:0043531
Vvi13g1296 1330 SUPERFAMILY L domain-like 817 1044 - -
Vvi13g1296 1330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 444 IPR027417 -
Vvi13g1296 1330 FunFam Probable disease resistance protein At1g63360 430 516 - -
Vvi13g1296 1330 Gene3D Ribonuclease Inhibitor 804 944 IPR032675 -
Vvi13g1296 1330 Gene3D Ribonuclease Inhibitor 515 802 IPR032675 -
Vvi13g1296 1330 Gene3D Ribonuclease Inhibitor 1195 1316 IPR032675 -
Vvi13g1296 1330 Gene3D Ribonuclease Inhibitor 959 1100 IPR032675 -
Vvi13g1296 1330 Gene3D Ribonuclease Inhibitor 1101 1194 IPR032675 -
Vvi13g1296 1330 Gene3D - 346 429 IPR042197 -
Vvi13g1296 1330 SUPERFAMILY L domain-like 502 865 - -
Vvi13g1296 1330 Gene3D - 171 340 IPR027417 -
Vvi13g1296 1330 FunFam Probable disease resistance protein At1g61300 172 341 - -
Vvi13g1296 1330 PANTHER DISEASE RESISTANCE PROTEIN RP 39 798 IPR044974 GO:0006952
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi13g1296 Vvi-Chr13 21316389 21320718 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1296 210 535 WRKY Transcription Factor Family AT5G45050 25.588 6.11e-10 62.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1296 - - vvi:100258434 1523.06