Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1265 ATGATGGGAAACAAGGCCTCCTGTTGGGTTGTCTTCTTGTTGTTCATTTTCTCAAGCTTTCTGGCCGAGAGCCATGGAAAAACAATGAAGCAGATAGAGGCACTGGATATTCTCCAGAAGGCCAAGCTGCATGGAAATTCAGGCATAGACACCAACCTTTTTGAAGTGAATGAAGTTGAAAATGGAGCTGAAACTGAAAGCCATAAGATTCATCCACAGGAGGGGCTGAAGGAGAAAGACAGGATTGATATGTTGCCTGGACAACCACATGTTGGGTTCAGCCAGTATGGTGGGTATGTCACCATTGACGAATCCAAGGGCAAAGCTTTGTACTACTACTTTGCTGAAGCACCACTCAGCAAGAAGTCTTTGCCTCTTCTTCTCTGGCTTAATGGAGGTCCTGGTTGTTCTTCTCTTGCTTACGGAGCAATGCAAGAGCTCGGCCCATTTAGGGTCCATAGCGAAGGCAAAACACTTTATAGAAACCAATATGCATGGAACAAGGTTGCAAATGTATTGTTCTTGGAGTCACCTGCCGGAGTAGGGTTCTCATACTCTAACACAACATCCGATTACCGGAACGGTGGAGACCGGAAAACGGCGAAAGACAACTATGCCTTTCTGGTGAACTGGCTGGAGAGGTTTCCTGAGTACAAGAAGAGGGATTTCTACATTTCTGGTGAAAGCTATGCTGGGCATTATGTACCTCAACTTGCACACACCATTCTTCATCACAACAAGAAGGCAGATGGGCCCATCATCAACCTCAAAGGGATCATTATTGGAAATGCAGTGATCAATGATGAAACCGATGAGCTTGGAATGTACCAGTACTTTGGGAGTCATGCTCTTGTTTCAGAGAAAACCATACGCCAAATGGAGAAACACTGTAATTTCTCCCCCGGAGCCGCCAGCCAGAGCAAGGAATGTACAAAAGCTTCTGATGAAGTTGATGATAACATTGACGTTATCGATATCTACAACATTTACGCCCCATTATGTTTCAACACCAATCTCACAGTCAAGCCCAAGAAAGTCACACCTGAATTCGATCCATGCAGCGATTACTATGTGTATGCTTATCTGAATAGGGCTGATGTTCAAAAGGCCCTCCATGCCAATGTGACCAAGCTCAAGTATGACTGGGAACCTTGCAGTGACGTTATCCAAAATTGGACAGATAGCCCCTCCACCATCATTCCCCTTCTGCACGAGTTCATGGAAAATGGTCTCCGTGTATGGGTATTTAGTGGGGATACGGATGGAAGGGTGCCAGTGACATCAACCATGGCTTCTATTGATACGATGAAGCTCTCTGTAAAGACTCCATGGCACCCTTGGTTCGTTGCTGGGGAGGTTGGTGGATATACAGAAGTGTACAAGGGAGATCTAACATTTGCTACAGTAAGAGGAGCAGGGCACCAAGTGCCAAGTTTCCGGCCCAAGAGAGCTCTTTCACTCATTTCTCACTTCCTTTCTGGCACTCCTCTTCCCAGGCGTTCATCAAAACACTGA 1515 0.4601 MMGNKASCWVVFLLFIFSSFLAESHGKTMKQIEALDILQKAKLHGNSGIDTNLFEVNEVENGAETESHKIHPQEGLKEKDRIDMLPGQPHVGFSQYGGYVTIDESKGKALYYYFAEAPLSKKSLPLLLWLNGGPGCSSLAYGAMQELGPFRVHSEGKTLYRNQYAWNKVANVLFLESPAGVGFSYSNTTSDYRNGGDRKTAKDNYAFLVNWLERFPEYKKRDFYISGESYAGHYVPQLAHTILHHNKKADGPIINLKGIIIGNAVINDETDELGMYQYFGSHALVSEKTIRQMEKHCNFSPGAASQSKECTKASDEVDDNIDVIDIYNIYAPLCFNTNLTVKPKKVTPEFDPCSDYYVYAYLNRADVQKALHANVTKLKYDWEPCSDVIQNWTDSPSTIIPLLHEFMENGLRVWVFSGDTDGRVPVTSTMASIDTMKLSVKTPWHPWFVAGEVGGYTEVYKGDLTFATVRGAGHQVPSFRPKRALSLISHFLSGTPLPRRSSKH* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1265 504 ProSitePatterns Serine carboxypeptidases, histidine active site. 464 481 IPR033124 GO:0004185
Vvi13g1265 504 FunFam Carboxypeptidase 76 336 - -
Vvi13g1265 504 Gene3D - 399 494 - -
Vvi13g1265 504 Gene3D alpha/beta hydrolase 76 336 IPR029058 -
Vvi13g1265 504 Pfam Serine carboxypeptidase 87 494 IPR001563 GO:0004185|GO:0006508
Vvi13g1265 504 SUPERFAMILY alpha/beta-Hydrolases 81 498 IPR029058 -
Vvi13g1265 504 FunFam Carboxypeptidase 350 497 - -
Vvi13g1265 504 Gene3D - 353 390 - -
Vvi13g1265 504 FunFam Carboxypeptidase 399 494 - -
Vvi13g1265 504 ProSitePatterns Serine carboxypeptidases, serine active site. 225 232 IPR018202 GO:0004185
Vvi13g1265 504 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 83 481 IPR001563 GO:0004185|GO:0006508
Vvi13g1265 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Vvi13g1265 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Vvi13g1265 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 211 236 IPR001563 GO:0004185|GO:0006508
Vvi13g1265 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1265 Vvi-Chr13 20963563 20967515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1265 361 497 Calmodulin-binding Proteins AT2G22960 29.197 1.92e-15 72.8