Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1241 ATGACAGCAATTGAAAGAAATTCAGCTGGTCCAAGTGATGCAGTTGTCAGTGTGTACATTGATCATGAAAAGAAGTTTGCACTCGTGGAGATGAGAATTGTTGAAGAAGCAAGTAATGCGATGGCATTGGGTGGAATTTTATTGTGCGTAACAGGCTCAGAGGCAATGTTTTCTGATCTTGGACACTTCTCATACACTGCAATTCAGATTACCTTCGCTTTCTTGGTTTATCCTGCTCTGATATTGGCATATATGGGTCAAGCTCCTTACTTGTTGATACATCGTGACACCAGTTACCCGATCATTTTTTTATGTTTCAGTTCCAGAAATTGTGAGGTGGCCTATGCATATAATAGCGATTTTTGCCTCTGTTGTGGGAAGTCAAGCAATCATCAACAGAACGTTCTCTATAATCAACCAGTGTCAGTCATTTGGATGCTTCCCAAGAGTCAAGGTTGTTCATGCCTCTGA 471 0.4098 MTAIERNSAGPSDAVVSVYIDHEKKFALVEMRIVEEASNAMALGGILLCVTGSEAMFSDLGHFSYTAIQITFAFLVYPALILAYMGQAPYLLIHRDTSYPIIFLCFSSRNCEVAYAYNSDFCLCCGKSSNHQQNVLYNQPVSVIWMLPKSQGCSCL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1241 156 Gene3D - 1 51 IPR012677 -
Vvi13g1241 156 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 38 97 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi13g1241 156 Pfam K+ potassium transporter 35 103 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1241 Vvi-Chr13 20667396 20667866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1241 36 103 Inorganic Solute Cotransporters AT2G40540 67.647 9.11e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1241 K03549 - vvi:100232992 107.071