Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1226 ATGGCTTTTGTTGGAGAGGCTATTCTCTCTTCTTTCTTTGACACCCTGTTCGACAAGTTATCTTCGGTCCTGATCGATTATACTCGCCAAGTGCAAGTTCATGATGAGCTCAACAAGTGGGAGAAAACACTGAAGAAAATTAATGCCGTGCTGGAGGATGCGGAGGAGAAGCAGATGGAAGAGAAGGTGGTGAAGATATGGCTGGACGACCTCAGTGACTTGGCTTATGATGTGGAGGACATCCTGGACGACTTGGCCACTCAAGCTTTGGGGCGGCAGTTGATGGTGGAAACTCAACCCAGCACTAGTAAGTTCCGGAGCCTTATCCCTTCTTGTTGTACTAGTTTCACTCCAAGTGCTATTAAGTTCAATGTTGAGATGAGGACCAAGATAGAGAATATCACTGCCAGGTTGGAAAATATTTCTTCACGGAAAAATAATCTCCTTTCAACAGAAAAAAATTCTGGGAAAAGGTCCGCCAAAACAAGAGAAATACCACACACCACTTCTTTGGTAGATGAACCTATTGTTTATGGAAGGGAAACAGAGAAAGCAGCCATAGTCGACTCTTTGCTCCATTATCATGAGCCAAGTGATGATGCAGTCCGTGTCATTGCCATAATTGGCATGGCAGGCGTGGGCAAAACTACTCTTGCTCAGTTTGCCTACAACCATGATGGAGTGAAGAGTCATTTTGATCTAAGAGTTTGGGTTTGCGTCTCTGATGAGTTTGATGTCGTGGGGGTAACCAGGACAATTCTTCAGTCAGTTGCCTCTACCTCTAGGAAATCCGATGCCAAGGATCTCAACCAGCTTCAAGTCCAACTGAATGATGAACTCTCTGGAAAAAAGTTTCTCCTTGTTTTAGACGACGTTTGGAGTCAGGATTGTAATAAATGGAACCTTTTATACAAGCCAATGAGAACTGGAGCACAAGGCAGCAGGGTTATTGTCACCACTCGTGATCAAAGGGTTGTACCAGCTGTCAGAGCCAGCTCAGCTTATCCCCTCGAGGTGTTATCAAATGACGATTGCTTATCTTTGTTTGCCCAGCATGCATTTATACATACCAGAAACTTTGATAATCATCCACACTTGAGAGCTGTCGGCGAACGAATTGTGAAAAAGTGCAGGGGGCTACCTTTGGCTGCAAAGGCCTTAGGAGGAATGTTGCGCACACAACTAAATCGTGATGCATGGGAGGAAATACTCGGAAGCAAGATATGGGAGTTACCAAAAGAGAATAACAGTATTCTTCCAGCTCTCAAATTGAGTTATCATCATCTTCCTTCTCATTTGAAGTGCTGCTTTGCTTACTGCTCTATATTTCCAAAGGACTACGAATTCAATGTGGATGAATTAGTCTTGCTGTGGATGGGAGAGGGATTCCTTCACCAAGTGAACAGAAAGAAGCAGATGGAGGAGATAGGCACCGCGTACTTTCATGAATTATTAGCAAGGTCTTTTTTCCAACAATCTAATCATCATTCATCACAATTTGTGATGCATGATCTTATTCATGATCTTGCTCAATTGGTTGCTGGAGACGTATGTTTCAATTTGGAGGACAAATTGGAAAACGATGACCAACATGCTATTTCTGCAAGAGCTCGTCATTCATGTTTCACTCGGCAAGAATTTGAGGTTGTTGGAAAATTTGAAGCCTTTGACAAAGCGAAGAATCTACGCACATTAATAGCAGTACCAATCACAATGCCTCAAGATTCATTTACTTTGTCCGGAAAAATATCTAACCAGGTGTTACATAACCTAATAATGCCAATGAGATACTTGCGGGTACTATCTTTGACTGATTATATCATGGGAGAGCTACCATGTTTGATTGGTGAGTTAATACATCTGCGTTATCTCAATTTTTCCAACTCTAGGATACAAAGTCTACCTAATTCAGTGGGTCATCTTTATAATTTACAAACGTTGATATTACGTGGTTGTCATGAACTTACCGAATTGCCTATAGGGATTGGAAAGCTGAAAAACCTTCGGCACCTTGATATTACACGTACAAGTCGACTACGAGAAATGCCTTTCCAATTTAGCAACCTCACAAATTTGCAAGTGTTGACTAGGTTCATTGTGAGCAAAAGTAGAGGGGTTGGAATTGACGAACTCAAGAATTGTTCGAACCTCCAAGGAGTGCTTTCTATTTCTAGTTTGCAAGAGGTAGTGGATGTTGGAGAGGCAAGAGCTCCTAATTTAAAAGATAAAAAAAAAATTGAAGAGTTGACGATGCAGTGGAGTAATGATTCTTGGGATGTACGAAACGATATATGTGAACTGCATGTCTTGGAGTCCTTGCAGCCTCGTGAAAATTTAAAAAGGCTCACAATTGCATTTTATGGTGGATCCAAATTTCCAAGTTGGTTAGGAGATCCCTCATTCTCAGTAATGGTGGAACTAACTCTCAAAAATTGCCAAAAATGCATGTTATTACCAAATCTGGGTGGACTATCGGTGCTCAAGGTTTTGTGTATTGAAGGTATGAGCCAAGTTAAAAGCATAGGTGCTGAATTTTATGGAGAGAGTATGAATCCTTTTGCATCTTTGAAGGAGTTGAGGTTTAAGGATATGCCAGAATGGGAAAATTGGTCTCATTCTAATTTCATCAAGGAAAATGTGGGAACATTTCCCCATCTTGAAAAGTTTTTTATGAGGAAATGTCCAAAACTGATTGGGGAATTGCCGAAATGCCTGCAGTCCCTAGTAGAGCTTGAAGTGTTAGAATGTCCGGGATTGATGTGTGGGCTTCCAAAACTTGCATCTCTCCGTGAATTAACTTTAAAAGAATGCGATGAGGCAGTGTTGGGAGGTGCTCAGTTTGATCTTCCATCCCTCGTTACTGTAAATCTCATCCAGATTTCAAGATTGACATGTTTGAGGACCGGATTTACTAGATCCTTGGTAGCCTTGCAAGAATTGCGGATATACAATTGTGATGGGCTGACATGTTTGTGGGAGGAGCAATGGCTGCCTTGCAATCTTAAAAAATTGGAAATACGTGATTGTGCTAATCTGGAGAAGCTGTCGAATGGATTGCAAACTCTCACACGTCTTGAAGAGCTGGAGATATGGAGTTGCCCCAAACTAGAGTCATTTCCTGATTCGGGTTTCCCACCAATGCTAAGACGCCTAGAGTTGTTCTATTGTGAGGGTCTAAAATCGCTGCCTCATAACTACAGCTCGTGTCCGCTTGAAGTCTTGACGATTGAGTGTTCTCCATTTCTCAAATGCTTCCCAAATGGTGAGCTACCCACCACACTCAAGAACCTTCGTATTAGAAATTGTCTAAGTCTAGAGTCTCTACCAGAGGGGCTGATGCACCACAATTCAACCTCCAGCAGCAACACTTGTTGTCTTGAAACATTGTTAATAGATAATTGTTCCTCTCTCAATTCCTTTCCAACAGGGGAGTTACCCTTCACTCTCAAGAAACTTTCTATAACCAGATGCACAAACTTGGAGTCAGTGTCAGAGAAAATGTCACCCAACAGTACAGCCCTAGAGTATTTACAACTTATGGAGTATCCAAATCTGAAAAGCCTACAAGGATGCCTTGACAGCCTTCGGAAGCTCGTCATAAACGATTGTGGAGGTCTGGAGTGCTTTCCAGAAAGAGGCTTGTCCATCCCTAACCTCGAATACCTTAAAATTGAGGGATGTGAGAATCTTAAATCTCTAACACATCAAATGAGAAACCTCAAATCTCTGCGCAGCTTGACCATATCCGAATGCCTAGGATTGGAGTCCTTTCCGAAAGAGGGTTTGGCCCCTAACCTAGCATCACTTGGGATCAATAACTGTAAGAATCTGAAAACGCCCATATCTGAGTGGGGCTTCGACACCCTGACCACTCTTTCTCATTTGATTATTAGGGAAATGTTTCCAGATATGGTTTCCTTTCCGGTTAAAGAGAGTCGTCTTCTCTTTTCTCTCACCCGCCTTTATATCGATGGAATGGAATCCTTAGCCTCCTTGGCTCTCTGCAACCTCATCTCTCTTCGATCCCTAGATATCTCAAATTGCCCTAACCTCTGGTCCTTAGGGCCGCTTCCTGCAACACTTGAAGAACTTTTCATCTCTGGTTGTCCTACCATAGAAGAAAGATACTTAAAAGAGGGAGGAGAATATTGGTCTAACGTCGCCCACATCCCCTGCATTTATGAAGGCATTCAAAGATATGACATTGTAGATTGGATGCTGGATGGAATCATAGATGACTTGACCTTCCTTGATTTCAACGATTCAAATTTTCTCATCTAA 4281 0.4216 MAFVGEAILSSFFDTLFDKLSSVLIDYTRQVQVHDELNKWEKTLKKINAVLEDAEEKQMEEKVVKIWLDDLSDLAYDVEDILDDLATQALGRQLMVETQPSTSKFRSLIPSCCTSFTPSAIKFNVEMRTKIENITARLENISSRKNNLLSTEKNSGKRSAKTREIPHTTSLVDEPIVYGRETEKAAIVDSLLHYHEPSDDAVRVIAIIGMAGVGKTTLAQFAYNHDGVKSHFDLRVWVCVSDEFDVVGVTRTILQSVASTSRKSDAKDLNQLQVQLNDELSGKKFLLVLDDVWSQDCNKWNLLYKPMRTGAQGSRVIVTTRDQRVVPAVRASSAYPLEVLSNDDCLSLFAQHAFIHTRNFDNHPHLRAVGERIVKKCRGLPLAAKALGGMLRTQLNRDAWEEILGSKIWELPKENNSILPALKLSYHHLPSHLKCCFAYCSIFPKDYEFNVDELVLLWMGEGFLHQVNRKKQMEEIGTAYFHELLARSFFQQSNHHSSQFVMHDLIHDLAQLVAGDVCFNLEDKLENDDQHAISARARHSCFTRQEFEVVGKFEAFDKAKNLRTLIAVPITMPQDSFTLSGKISNQVLHNLIMPMRYLRVLSLTDYIMGELPCLIGELIHLRYLNFSNSRIQSLPNSVGHLYNLQTLILRGCHELTELPIGIGKLKNLRHLDITRTSRLREMPFQFSNLTNLQVLTRFIVSKSRGVGIDELKNCSNLQGVLSISSLQEVVDVGEARAPNLKDKKKIEELTMQWSNDSWDVRNDICELHVLESLQPRENLKRLTIAFYGGSKFPSWLGDPSFSVMVELTLKNCQKCMLLPNLGGLSVLKVLCIEGMSQVKSIGAEFYGESMNPFASLKELRFKDMPEWENWSHSNFIKENVGTFPHLEKFFMRKCPKLIGELPKCLQSLVELEVLECPGLMCGLPKLASLRELTLKECDEAVLGGAQFDLPSLVTVNLIQISRLTCLRTGFTRSLVALQELRIYNCDGLTCLWEEQWLPCNLKKLEIRDCANLEKLSNGLQTLTRLEELEIWSCPKLESFPDSGFPPMLRRLELFYCEGLKSLPHNYSSCPLEVLTIECSPFLKCFPNGELPTTLKNLRIRNCLSLESLPEGLMHHNSTSSSNTCCLETLLIDNCSSLNSFPTGELPFTLKKLSITRCTNLESVSEKMSPNSTALEYLQLMEYPNLKSLQGCLDSLRKLVINDCGGLECFPERGLSIPNLEYLKIEGCENLKSLTHQMRNLKSLRSLTISECLGLESFPKEGLAPNLASLGINNCKNLKTPISEWGFDTLTTLSHLIIREMFPDMVSFPVKESRLLFSLTRLYIDGMESLASLALCNLISLRSLDISNCPNLWSLGPLPATLEELFISGCPTIEERYLKEGGEYWSNVAHIPCIYEGIQRYDIVDWMLDGIIDDLTFLDFNDSNFLI* 1427
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1226 1426 CDD RX-CC_like 5 143 IPR038005 -
Vvi13g1226 1426 PANTHER DISEASE RESISTANCE PROTEIN RP 33 861 IPR044974 GO:0006952
Vvi13g1226 1426 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 440 IPR027417 -
Vvi13g1226 1426 Coils Coil 37 57 - -
Vvi13g1226 1426 Coils Coil 124 151 - -
Vvi13g1226 1426 Gene3D - 339 430 IPR042197 -
Vvi13g1226 1426 SUPERFAMILY L domain-like 923 1165 - -
Vvi13g1226 1426 FunFam Probable disease resistance protein At1g63360 426 512 - -
Vvi13g1226 1426 PRINTS Disease resistance protein signature 279 293 - -
Vvi13g1226 1426 PRINTS Disease resistance protein signature 204 219 - -
Vvi13g1226 1426 PRINTS Disease resistance protein signature 377 391 - -
Vvi13g1226 1426 PRINTS Disease resistance protein signature 663 679 - -
Vvi13g1226 1426 Gene3D Ribonuclease Inhibitor 737 917 IPR032675 -
Vvi13g1226 1426 Gene3D Ribonuclease Inhibitor 553 736 IPR032675 -
Vvi13g1226 1426 Gene3D Ribonuclease Inhibitor 1262 1379 IPR032675 -
Vvi13g1226 1426 Gene3D Ribonuclease Inhibitor 1189 1261 IPR032675 -
Vvi13g1226 1426 Pfam Rx N-terminal domain 9 106 IPR041118 -
Vvi13g1226 1426 Gene3D - 431 511 IPR036388 -
Vvi13g1226 1426 Gene3D Ribonuclease Inhibitor 918 1120 IPR032675 -
Vvi13g1226 1426 Pfam NB-ARC domain 181 427 IPR002182 GO:0043531
Vvi13g1226 1426 Gene3D - 157 334 IPR027417 -
Vvi13g1226 1426 Gene3D - 13 141 - -
Vvi13g1226 1426 FunFam Probable disease resistance protein At1g61300 159 333 - -
Vvi13g1226 1426 SUPERFAMILY L domain-like 501 916 - -
Vvi13g1226 1426 SUPERFAMILY L domain-like 1071 1380 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi13g1226 Vvi-Chr13 20462915 20467293 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1226 202 841 WRKY Transcription Factor Family AT5G45050 24.103 2.46e-15 80.1