Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1203 ATGGAAGTGAAACGTCGCACGGCTCGATCTCTAGTCGCCAGGCTCAGCTCCGTTTCTCAGCAAACAAGAACCGAGGCACTATGTGAGCTCCGCCTCATCTCCAAGCACGACCCCGACAGCCGCTGCTTCATCGCCGACGCCGGCGCTGTTCCCTACCTTTGCGAAACTCTTTACTCCGCCCTTCCCCTCGAACAAGAAAACGCTGCCGCCACCCTCCTCAACCTCTCCATCTCCAGCCGCCAACTCCTCATGTCCACGCGCGGTCTCCTCGACGCTCTCTCTCATGCTCTCCGCTCCCCCTCCTCCTCCCCCGCCGCCATCCAGGCATGCGCCGCCACCCTCTACAGCCTTCTTGTTGATGATGATTACCGCCCCATCATCGGAGCAAAGCGCGACATCGTCTACGCACTCGTGGACATTATACGTACCCCCCACGCGCCGCCAAGGTCCATCAAGGATGCCCTCAAGGCACTCTTCGGGATCTCCCTCTACCCGCTCAACCGCGCCTCCATGGTGGGGCTCGGCGCCGTGGCGGCGCTGTTCACGCTAGCTGTGAAGGACGGGCGCGTCGGAATCGTGGAGGACGCCACGGCGGTGATCGCGCAGATCGCCGGATGCGAGGAGGGTGGAGACGCGTTTCGGAAGGTCTCCGGAATTGGGATTTTGGTGGACTTGCTCGATCCTTCCACGGGATCAAGTATAAGGACCAAGGAGAATGCAGTGTCAGCGCTGTTGAATTTGGTGCAATGCGGAGGCGAGAGGATCGCCGGAGATATGAGGGAGGCGGGGATGGGGTTGTACGATGGCATTGCAGTCGTTGCAGATGGTGGAAGCCCCAAAGGGAAGAGCAAGGCCATTGCATTATTGAAGCTTCTAGATGGAGGGAGAGAACCTCGGTTTGCTTCAAATCCTGATCGAAAGGAAAAAAAAAAATGA 936 0.5887 MEVKRRTARSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSALPLEQENAAATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVDDDYRPIIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAALFTLAVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENAVSALLNLVQCGGERIAGDMREAGMGLYDGIAVVADGGSPKGKSKAIALLKLLDGGREPRFASNPDRKEKKK* 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1203 311 FunFam ARM repeat superfamily protein 2 297 - -
Vvi13g1203 311 PANTHER U BOX DOMAIN-CONTAINING 8 296 - -
Vvi13g1203 311 SUPERFAMILY ARM repeat 9 254 IPR016024 -
Vvi13g1203 311 Gene3D - 2 270 IPR011989 -
Vvi13g1203 311 SMART arm_5 206 249 IPR000225 GO:0005515
Vvi13g1203 311 SMART arm_5 37 77 IPR000225 GO:0005515
Vvi13g1203 311 SMART arm_5 164 205 IPR000225 GO:0005515
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1203 9 297 U-box Gene Family AT2G23140 36.395 2.19e-36 136
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1203 - - vvi:100249738 587.8