Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1052 ATGGATGCTGCACTCCCTGAGGAGGCTCTAAGGCCATTAAGGCCTGACTTAGAAAAGAAATTGGCATGGCGCACTTTTGTTAAATCCGCAGAGACTATCTTTGAGATGGTTCAAGCAACAATCATGCTCGAGGACATGATTAAGATTGAATATTTGATGAACGGATGGTGGTATTGGTCATCACTCTCTGCTGCTGCCAAGACTTCTGTTGTTTCTTCCCTTGCCCTCTGCATATACTCTCTGGATGCTGCCATTGCTTATGAGAAGATCTCATTTAATTTGGATGACTAG 291 0.4364 MDAALPEEALRPLRPDLEKKLAWRTFVKSAETIFEMVQATIMLEDMIKIEYLMNGWWYWSSLSAAAKTSVVSSLALCIYSLDAAIAYEKISFNLDD* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1052 96 PANTHER OS02G0192300 PROTEIN 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1052 Vvi-Chr13 16578885 16579175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1052 1 89 C2H2 Transcription Factor Family AT3G01460 65.169 2.78e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1052 K22768 - vvi:100245816 169.859