Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1035 ATGGCGCAGGTCATGAACATGCCCCTCGACTCCCTCGAAAAGCCCGACAAATCCCCCTCCGCCACCGCTGACGCCGTCGCTGACGATGACTCTGCGCCACCACCGCCACCACCTCCGCCTCCGTCGCAGCCCCAACAGACTTTGCCCGTTAGGCGGAGGGACAGAGATTCCAGGGAGAGGATGGACGATAGGGACGGCGATCGCCCTCGTAATCGCCGCGGCAGCGGCGCCGATCACTACGACCGGAACCTGTCTCCTCCGCCACGGGACCGAGAGAGGGACTTCAAGCGCCGCCGTAGCCCCAGCCCTCCTTACCGCGACCGCCGCCACTCACCGCCGCGCCGCTCCTCTCCGCCATTGCATTTCAAGCGCTCTCGGAGAGATGATGGCGGCTATGATAGGCGGGGAAGTCCCCGTGGTGGGTTTGGCCCAGATGACAGAAGGTTTGGCTATGATTATATTGGTGGTTATGAACGGATGGGAGGCCGGCCTGGATATCCTGATGAAAAATCTCATGGTCGGTTTATGAATCGTTCAGATTGGGAATCTAATCGTGGTGGTTATGCTGACTTGTTAGACACAGGAAGTAAACAAAGAGAAGGTTTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAAGATGATATATTACCAGCTGAAGCTGAGCGCAGGTATCAAGAATATAGATCAGAATACATTTCTACTCAGAAGCGTGCCTTCTTTGATGCTCATAAGGATGAGGAGTGGTTGAAAGACAAGTACCATCCAACAAATTTACTTGCAGTCATTGAAAGGAGGAATGAAAATGCTCGACGGATGGCAAAGGATTTTTTACTTGATTTGCAGAGTGGAACCTTGGACATAGGCCCTGGTGTAAATGCCTCGTCATCAAACAAATCAGGGCAAACCAGTGATCCAAACTCTGATGATGAAACTGAGACTGGTGACAAACGAAGACGACATGGTAGGGGACCGATCAAAGAAAGTGATCTTTCGACTGCTGCAGTGGCTCATCCAAACAGTTCTGAGCCTAGACGAATACAAGCTGATATAGAACAAGCACTGGCTCTTGTGCGCAAGCTTGATTCTGAAAAAGGGGTTGAAGATAATATTTTATGCAGTGCTGAACAAAAAAAGACGGACAGTGATAAATCTCACAGTGGATCCATGGGCCCTATTATAATCATACGAGGTTTAGCGTCTGTCAAGGGCCTTGAAGGAATTGAGCTATTGGACACAATTCTTACTTATCTTTGGCGTATCCATGGTTTGGATTACTATGGCATGGTTGAAACAAGTGAAGCCAAGGGTCTTCGGCATGTGAGAGCAGAGGGAAAGGGTCATGAAGAAAATAGTAAAGCTGGGGCTGACTGGGAAAAGAAATTAGACTCTCGTTGGCAAGACAGGTTGAGGGGTCAGGATCCCTTGGAAACAATGGCTGCTAAAGAGAAGATAGATGCAGCAGCTGTTGAAGGTTTAGATCCATATGTACGAAAAATAAGAGATGAGAGGTATGGATGGAAGTATGGTTGTGGAGCCAAGGGTTGCACAAAGCTCTTCCATGCAGCTGAATTTGTGCATAAGCATCTGAAGTTGAAACACCCTGAACTCGTCATGGATCTGACTACGAAAGTGCGTGAGGATCTGTATTTCCAAAACTATATGAATGATCCAGATGCTCCTGGTGGGACACCTGTCATGCAGCAGCAGCTGCTGAAAGACAGGCTACAGAGGCGTAGGCCTGGTCTGGATAATCGATTGAAAGATGATCGTGGTAACAGGAGGGAACATGACAGGATTGAAAGAATTAACGACGGTGAACGGTTTGATAGGACTGATAACTCTCCACCCCATGATCGACAGTCCAAAGGTGGTGGCTTGGAAGGAGGAAATCTTGATGAATCCATGTATGATACTTATGGTGGGAAAGACTTGGGTGTCATTCCGCCTTTTCCCTCAGATATGGGTCCTCCTCCAGTCTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCTTTTGTTCCTGCACCACCTGAGGTTGCAATGCGTATGTTAAGGGAGCAGGGAGGCTCATCCTCATATGAAGGTGGTAGACAAATGCGTACTGGTCCCCATATTGGGGGACCGGCACCGATCCTTGGTGTATCATCTGCTTTTAGACAAGATCCTCGACGATTACGAAGTTATCAAGATCTGGATGCCCCAGAGGATGAAGTGACCGTGATAGACTACAGGAGCTTGTAG 2244 0.492 MAQVMNMPLDSLEKPDKSPSATADAVADDDSAPPPPPPPPPSQPQQTLPVRRRDRDSRERMDDRDGDRPRNRRGSGADHYDRNLSPPPRDRERDFKRRRSPSPPYRDRRHSPPRRSSPPLHFKRSRRDDGGYDRRGSPRGGFGPDDRRFGYDYIGGYERMGGRPGYPDEKSHGRFMNRSDWESNRGGYADLLDTGSKQREGLMSYKQFIQELEDDILPAEAERRYQEYRSEYISTQKRAFFDAHKDEEWLKDKYHPTNLLAVIERRNENARRMAKDFLLDLQSGTLDIGPGVNASSSNKSGQTSDPNSDDETETGDKRRRHGRGPIKESDLSTAAVAHPNSSEPRRIQADIEQALALVRKLDSEKGVEDNILCSAEQKKTDSDKSHSGSMGPIIIIRGLASVKGLEGIELLDTILTYLWRIHGLDYYGMVETSEAKGLRHVRAEGKGHEENSKAGADWEKKLDSRWQDRLRGQDPLETMAAKEKIDAAAVEGLDPYVRKIRDERYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVMDLTTKVREDLYFQNYMNDPDAPGGTPVMQQQLLKDRLQRRRPGLDNRLKDDRGNRREHDRIERINDGERFDRTDNSPPHDRQSKGGGLEGGNLDESMYDTYGGKDLGVIPPFPSDMGPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGSSSYEGGRQMRTGPHIGGPAPILGVSSAFRQDPRRLRSYQDLDAPEDEVTVIDYRSL* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1035 747 MobiDBLite consensus disorder prediction 575 618 - -
Vvi13g1035 747 MobiDBLite consensus disorder prediction 1 150 - -
Vvi13g1035 747 Pfam SERRATE/Ars2, N-terminal domain 206 287 IPR021933 -
Vvi13g1035 747 Pfam Arsenite-resistance protein 2 451 653 IPR007042 -
Vvi13g1035 747 MobiDBLite consensus disorder prediction 30 46 - -
Vvi13g1035 747 MobiDBLite consensus disorder prediction 690 716 - -
Vvi13g1035 747 PANTHER ARSENITE-RESISTANCE PROTEIN 2 337 745 IPR039727 GO:0006397
Vvi13g1035 747 MobiDBLite consensus disorder prediction 575 643 - -
Vvi13g1035 747 MobiDBLite consensus disorder prediction 122 146 - -
Vvi13g1035 747 MobiDBLite consensus disorder prediction 49 114 - -
Vvi13g1035 747 MobiDBLite consensus disorder prediction 289 308 - -
Vvi13g1035 747 ProSitePatterns Zinc finger C2H2 type domain signature. 511 534 IPR013087 -
Vvi13g1035 747 MobiDBLite consensus disorder prediction 310 327 - -
Vvi13g1035 747 MobiDBLite consensus disorder prediction 289 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1035 Vvi-Chr13 16040906 16066271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1035 86 747 C2H2 Transcription Factor Family AT2G27100 66.228 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1035 - - vvi:100266053 1340.87