Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g1027 ATGGCTTCCATTCTGCAATTCTTCCTTTCTCTTTGTCTGCTCCATCTTCTCATCTCCCTCTCTGCTGCTTCAAATGAAAATGAAATTCCAAAGTCTTATGTTGTTTATATGGGGAAATCATCAAACAACCATGGGGGAGAGGCTGAAGTTGCAGAGTCAAGTCATTTGCAGCTATTGTCCGCCATTATTCCAAGCTCTGAGAGTGAGAGAATATCTCTCATCCATTCTTACAATCATGCTTTCAAGGGCTTCTCTGCCATGCTCACACAGGGTGAAGCTTCTATACTCTCTGGCCATGAGGAAATAGTATCTATCTTTCCAGATCCACTTCTTCAACTACATACTACAAGATCTTGGGATTTCTTGAATGTGGAATCTGGAATTACATCAACTCCCTTATTTCATCACAACCTATCTAGGGATGTCATAATTGGGGTCATTGACACAGGGATATGGCCTGAGTCTCCAAGTTTCAGTGACAATGGTATCGGAGAAATCCCTTCAAGATGGAAAGGAGTTTGCATGGAAGGATCTGACTTCAAAAAATCCAACTGTAACAGGAAGCTGATAGGAGCAAGATACTACAACACCCCAAAGGCCTTAATCCAACCAAAATCCAGCAGTAATAAGAGCCACCCCATTAACCTCACCGGCTCTCCAAGGGACTCAGTAGGCCATGGGACACATACTGCATCCATCGCAGCTGGTGCACCCATCGCCAATGCTAGTTACTATGGTCTGGCTCCAGGTACTGCAAGGGGTGGCTCGCCTTCCGCCAGGATTGCAAGCTACAAGGCTTGTTCGTTAGAAGGTTGTTCTGGTTCCACCATAATGAAAGCATTTGATGATGCAATTAAGGATGGAGTTGATATAATCTCAGTTTCCATTGGGATGACCTCAATTTTTCAGTCAGACTTCCTTAATGACCCCATTGCTATAGGAGCTTTTCATGCTCAGCAGATGGGGGTAATGGTGGTTTGCTCAGCAGGGAACAGCGGGCCTGATCCTTACACCATTGTCAATTCAGCACCATGGATCTTTACCGTTGCAGCTTCTAATATTGATCGGGATTTCCAATCTACTGTAGTTCTTGGAAATGGGAAAACTTTTCCAGGGCCTGCGATCAACTTCTCCAACCTTACTCGCTCTAAAACATATCCTCTTGCTCGTTCAGAGGATGTTGCTGCTGCTTTTACCCCTTCATCAGATGCAAGGAGCTGCTATCCAGGATCATTAGATCCCAAGAAAGTTAGGGGCAAGATAATTGTTTGTTCTGGTGATGGGTCTAATCCGAGGCGTATCCAAAAATTAGTTGTAGAAGATGCAAAAGCGATAGGGATGATTTTGATTGACGAGTATCAGAAAGGTTCCCCCTTTGAATCAGGCATTTATCCCTTCACAGAAGTTGGAGATATTGCAGGGTTTCATATTCTCAAGTACATTAATTCCACCAAGAATCCAACTGCAACCATCCTTCCAACAAAGGAAGTTCCACGGATTAGGCCTGCACCAGTGGTTGCATTTTTCTCATCCAGAGGTCCAGGAGGGCTTACAGAAAATATTCTCAAGCCTGATATAATGGCTCCAGGAGTTGCTATTTTAGCAGCCATGATTCCAAAGACAGAAGTGGGGAGTGTTCCAATTGGGAGGAAGGTATCAAAATTTGGCATACGATCTGGAACGTCCATGGCGTGCCCCCATGTAACGGGGGCAGCTGCATTCATCAAATCGGTGCACCCACAATGGAGTTCTTCTATGATCAGATCAGCACTCATGACAACAGCAATCATTTCTAATAACATGAGGAAAGATTTGACAAATAGCACAGGTTTCTCTGCCAATCCACATGAGATGGGAGTTGGAGAAATAAGCCCACTCAGGGCTCTCAATCCAGGATTAGTTTTTGAGACCGCTTCAGAAGATTATCTCCATTTCCTTTGTTATTATGGCTACCCAGAGAAAACTATAAGAGCTGTGGCAAACAAAAAATTTACTTGTCCAAGCACTTCCTTTGATGAACTCATCTCCAACATCAACTACCCATCCATCTCTATAAGCAAGCTGGACAGGCATCTAGCTGCTCAAACTGTGACAAGGACTGTAAGGAATGTGGGATCCCCAAATTCAACCTACATTGCTCAACTGCATGCTCCAGTGGGACTGGAAATCACCGTCTCTCCTAAGAAGATAGTTTTTGTGGAAGGTTTAGAGAGGGCAACCTTTAAAGTCTCATTCAAAGGAAAGGAAGCTTCAAGGGGTTACAGTTTTGGATCTATAACATGGTTTGATGGTCTACATTCTGTTCGCACAGTCTTTGCGGTGAATGTGGAATAA 2334 0.4396 MASILQFFLSLCLLHLLISLSAASNENEIPKSYVVYMGKSSNNHGGEAEVAESSHLQLLSAIIPSSESERISLIHSYNHAFKGFSAMLTQGEASILSGHEEIVSIFPDPLLQLHTTRSWDFLNVESGITSTPLFHHNLSRDVIIGVIDTGIWPESPSFSDNGIGEIPSRWKGVCMEGSDFKKSNCNRKLIGARYYNTPKALIQPKSSSNKSHPINLTGSPRDSVGHGTHTASIAAGAPIANASYYGLAPGTARGGSPSARIASYKACSLEGCSGSTIMKAFDDAIKDGVDIISVSIGMTSIFQSDFLNDPIAIGAFHAQQMGVMVVCSAGNSGPDPYTIVNSAPWIFTVAASNIDRDFQSTVVLGNGKTFPGPAINFSNLTRSKTYPLARSEDVAAAFTPSSDARSCYPGSLDPKKVRGKIIVCSGDGSNPRRIQKLVVEDAKAIGMILIDEYQKGSPFESGIYPFTEVGDIAGFHILKYINSTKNPTATILPTKEVPRIRPAPVVAFFSSRGPGGLTENILKPDIMAPGVAILAAMIPKTEVGSVPIGRKVSKFGIRSGTSMACPHVTGAAAFIKSVHPQWSSSMIRSALMTTAIISNNMRKDLTNSTGFSANPHEMGVGEISPLRALNPGLVFETASEDYLHFLCYYGYPEKTIRAVANKKFTCPSTSFDELISNINYPSISISKLDRHLAAQTVTRTVRNVGSPNSTYIAQLHAPVGLEITVSPKKIVFVEGLERATFKVSFKGKEASRGYSFGSITWFDGLHSVRTVFAVNVE* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g1027 777 CDD Peptidases_S8_3 111 596 IPR034197 -
Vvi13g1027 777 CDD PA_subtilisin_like 361 491 - -
Vvi13g1027 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 114 IPR037045 -
Vvi13g1027 777 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vvi13g1027 777 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Vvi13g1027 777 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Vvi13g1027 777 Gene3D - 355 498 - -
Vvi13g1027 777 ProSiteProfiles Serine proteases, subtilase domain profile. 118 629 - -
Vvi13g1027 777 Gene3D Peptidase S8/S53 domain 141 642 IPR036852 GO:0004252|GO:0006508
Vvi13g1027 777 Pfam Fibronectin type-III domain 677 774 IPR041469 -
Vvi13g1027 777 SUPERFAMILY Subtilisin-like 113 633 IPR036852 GO:0004252|GO:0006508
Vvi13g1027 777 Gene3D - 646 776 - -
Vvi13g1027 777 MobiDBLite consensus disorder prediction 204 225 - -
Vvi13g1027 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Vvi13g1027 777 Pfam Peptidase inhibitor I9 32 114 IPR010259 -
Vvi13g1027 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 772 IPR045051 -
Vvi13g1027 777 Pfam Subtilase family 140 606 IPR000209 GO:0006508|GO:0008236
Vvi13g1027 777 FunFam Subtilisin-like protease SBT1.5 141 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g1027 Vvi-Chr13 15625581 15637796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g1027 33 774 Subtilisin-like Serine Gene Family AT1G20150 42.857 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g1027 K25898 - vvi:100243842 1512.66