Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0967 ATGTCAAGGCAAGCTAACCTTCCACCAAGATGCCCATTTCAAAAGAAACCCATTACTCGCCCAATCCATGATCCCATCTTTCCAAACCTCGGCAACGATAATGAATTGTATCCCCGACACCATAAGTCTTCCTCCCAAAGCTCAATTTCAGAGGAGCAACCTGCATGGTTTGATGACTTGTTGAATGACCCAGATTCAAATTTGAGAGGGATATGCCATCGGAGATCGGCTAGTGATTCAGTGGCTCTTTTGGATGGAGTTGTGGACCATTTTCCAAGTTTAAAACCCCTTAAAGATGATGAAAATTCGGTTTGTGATAGAATTGGTAGTGGGTTGGAGTCGGCTTGCATGTATGGTCCCAATTCCCCTCGACAGAGAGGCAACCAAACCTTTTCGGAGAATGCCATAGCTTCAGCTTTGTCAGAATATGCATCCAAAAGCCCTCTGGAGGACTTAGATGGGAGTTTTTGCATTTCTGGGATTAATCAATTTGATTTGAAGGAAAATGCTTGTGGTGCAGATGGGGAGCTCAATGCTGAGACAAAGGCAGTAAAAAGGCATTCTGGGCAGCGCTCAAGGGTTCGTAAACTCCAGTATATTGCTGAATTGGAAAGAACAGTCGATGTTTATCAGACTTTGGAATCAGAGTTGGCGATCAGAGTTGCTTCTCTGCTTCAGCTTCGTGTTGCATTGTCTATGGAAAACAGCAAACTAAAACAACAGTTGGCTAAACTGCAGCAGCAAAAGTTGATCATGGATGGGCAGCATAAGTCACTGAGGAAGGAAGTTGAAAGGATGAAAGGTGGTTTAGCAGATTCCATAAATAGCCAGATTCGAACATATACTGGGTCAAGCACTGGTGCTGAGGCAGTTAGATCGGAAGTTTCCTGGCTGAAGTTAGACATAGGAAAACTTAATCTTGATTGA 927 0.4369 MSRQANLPPRCPFQKKPITRPIHDPIFPNLGNDNELYPRHHKSSSQSSISEEQPAWFDDLLNDPDSNLRGICHRRSASDSVALLDGVVDHFPSLKPLKDDENSVCDRIGSGLESACMYGPNSPRQRGNQTFSENAIASALSEYASKSPLEDLDGSFCISGINQFDLKENACGADGELNAETKAVKRHSGQRSRVRKLQYIAELERTVDVYQTLESELAIRVASLLQLRVALSMENSKLKQQLAKLQQQKLIMDGQHKSLRKEVERMKGGLADSINSQIRTYTGSSTGAEAVRSEVSWLKLDIGKLNLD* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0967 308 Coils Coil 228 255 - -
Vvi13g0967 308 CDD bZIP_plant_RF2 185 228 IPR044759 GO:0003700|GO:0006355
Vvi13g0967 308 MobiDBLite consensus disorder prediction 1 51 - -
Vvi13g0967 308 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 3 306 IPR044797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0967 Vvi-Chr13 14222168 14232896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0967 168 254 bZIP Transcription Factor Family AT3G58120 47.826 2.14e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0967 - - vvi:100250801 590.497