Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0950 ATGAATCTCAGTCACTCTAGATATCTACGAGAAACCCCGGATTTCTCTGGGGTCATCAACCTTGAACAGTTAGTTCTTGAAGGTTGTATATCTTTGCGTGAGGTTCATCCTTCTCTTGTAGTTCTGAACAAACTCAAATTCCTGAGTTTGAAGAACTGCATAATGCTGAAGAGTCTTCCAAGCAACATTTATAATCTAAAATCTCTCGAAACCTTTGATGTTTCTGGTTGCTCAGATTGTGTGAACTTAAAGTGGCTAAAGGAGCTCTATGCAGACAAAGGAACACCATCTGCCTCACACTTGATGCCAAGGAGTTCAAATTCCATTTGTTTCATGTTGCCTCCTTTCCCAGTTTTGTGTTCCTTAACAAAACTAAACCTAACAAACTGCTTTATATCAGATGGCGCAAATCTCGGTAATCTTGGCTTCTTATCTTCGCTGAAATCCTTAAATTTGAGCGGAAACCTCTTTGTTACTTTGCCTTCAAGCATCAACCAACTTTCTCAACTGAAATGGCTGGGGTTGGAAAATTGCAAAAGACTTAAAACACTGCGGGAGCTTCCATCAAGCATAGAAGAGATCAATGCACATAATTGCACATCATTAACCACACTTAGCTCTGGCTTCAAACTGAAGGGGGATCCCTTGTTGCCCCCTCTTGAGCCTGCTTCCCCAGAGCTAGAAACCAGTATTCCAGAGTTGTTAAAAGCTGCATTCAGCCTTGTTATTCCTGGGAGAAGAATACCAGATTGGATCAGGAATCAGGACTGCAGTAGTGAAATAGAATTAGAGCTACCTCCAAGTTGGTTTAATTCCAATGTCCTGGCTTTTGCTTTTGCTGTAGTCTATAATTTCCCTCTTCCTCTCAGTCCCAGGAGTAGTGGTTGGGTTAGTGCAGACTGCAACTTCTATTCCCATCACAGTTCTTGGCACTATGCTGTCTATCCTCAGACTACTCTAAGGGGAGGATTGGAGTCAGATCATTTGTGA 990 0.4202 MNLSHSRYLRETPDFSGVINLEQLVLEGCISLREVHPSLVVLNKLKFLSLKNCIMLKSLPSNIYNLKSLETFDVSGCSDCVNLKWLKELYADKGTPSASHLMPRSSNSICFMLPPFPVLCSLTKLNLTNCFISDGANLGNLGFLSSLKSLNLSGNLFVTLPSSINQLSQLKWLGLENCKRLKTLRELPSSIEEINAHNCTSLTTLSSGFKLKGDPLLPPLEPASPELETSIPELLKAAFSLVIPGRRIPDWIRNQDCSSEIELELPPSWFNSNVLAFAFAVVYNFPLPLSPRSSGWVSADCNFYSHHSSWHYAVYPQTTLRGGLESDHL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0950 329 Gene3D Ribonuclease Inhibitor 96 217 IPR032675 -
Vvi13g0950 329 Pfam C-JID domain 243 300 IPR045344 -
Vvi13g0950 329 SUPERFAMILY L domain-like 2 207 - -
Vvi13g0950 329 ProSiteProfiles Leucine-rich repeat profile. 146 167 IPR001611 GO:0005515
Vvi13g0950 329 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 130 - -
Vvi13g0950 329 Gene3D Ribonuclease Inhibitor 1 92 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0950 Vvi-Chr13 13557882 13558871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0950 1 196 WRKY Transcription Factor Family AT4G12020 34.146 3.33e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0950 - - vvi:109123642 639.417