Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0948 ATGGGCGTAGCAGTAGGCATGGATGCGCTGAGTGAGAGAGCGGCGATGATGAGAGAGTCAGTGCAGAAGAGCCAGACCATCAGCGACAGCATCGTCTCCATTCTCGGCTCCTTCGACCACCGTCTCTCTGCCCTCGAAACTGCCATGCGTCCCACTCAGATTAGAACGCATTCTATTCGAAGAGCTCATGAGAATATTGACAAGACTTTGAAGGCTGCCGAGGTTATATTGGCTCAATTCGACCTTTATCGTCAGGCAGAGGGTAAAGTACTCAGAGGGCCACAGGAGGACCTAGAAAGTTACTTGGAATCTATTGATCAGCTAAGAAGCAATATTCGTTTTTTTAGCAGCAACAAAAGCTTCAAGAGTAATGATGGGGTGGTCAACCATGCAAATAATTTACTTGCCAAGGCAATTTCTAAGCTAGAAGAGGAGTTTAAGCAACTCTTATCATCTTACAGCAAACCTGTGGAGCCTGACCGTCTCTTTGATGGTCTCCCCAACTCACTGCGACCCTCCTCAGGATCTCCAGGAAACCAGGCTGACTCTAGCATTAAGGCTCTGTCCAACAATCATTCTGAGCACCAGAACAGTAACTTAGAAACTGCTGTTTATACACCTCCAACTCTTATACCACCTAGGGTTCTGCCATTGCTGCATGATTTAGCCCAACAAATGGTTCAAGCGGGGCACCAACAGCAGTTACTGAAGATTTACAGGGACACCCGTTCTTCAGTTTTTGAAGAAAGCCTCCGCAAATTGGGTGTGGAAAAGCTTAGCAAAGATGATGTTCAGAAGATGCAATGGGAGGTTTTGGAGGCTAAGATTGGGAATTGGATTCATTTCATGCGGATTGCTGTTAAACTATTGTTTGCTGGGGAACGAAAAGTTTGTGATCAAATATTTCAAGGCTTTGATTCACTCAGTGATCAGTGTTTTGCTGAAGTTACTGCAAGTAGTGTTTCGGTGCTACTTAGTTTTGGTGAGGCTATTGCTAGAAGCAAGAGATCCCCAGAAAAATTATTTGTGCTTCTAGACATGTATGAGATAATGCGGGAACTTCACTCAGAGATAGAAACAATTTTCAAGGGCAAAGCTTGCACTGAAATTAGAGAATCTGCATTGGGTTTGACAAAGCGGCTGGCCCAGACTGCTCAAGAAACCTTTGGTGATTTTGAAGAAGCAGTTGAAAAAGATGCAACAAAAACTGCTGTGTCTGATGGAACTGTTCATCCTTTGACAAGCTATGTGATCAACTATGTGAAGTTTCTTTTTGACTATCAATCAACACTGAAGCAACTCTTTCAAGAATTCGAAAACGAAAAAGAAACGACTTCTCAGTTAGCATCAGTAACAATGCGAATAATGCATGCTCTTCAAACCAATTTGGATGGGAAATCTAAGCAGTATAAAGATCCTGCTTTGACTCACTTATTTCTTATGAACAATATTCACTACATGGTCCGATCTGTGCGTAGGTCTGAAGCCAAAGATTTATTAGGGGATGATTGGGTGCAAAGACATCGAAGGATTGTGCAGCAGCATGCAAATCAGTACAAGAGGAATGCCTGGGCAAAGTGTCTCACCATTCAAGCGCTGACCTCCTCTGGTGGGGGTAGTACAGTCGGTACTGATGGTGGAAATAGTAGTGGAGTTTCAAGGGCAATGGTTAAAGACAGGTTCAAGACATTTAATATGCAGTTTGAGGAGCTGCATCAGAAACAATCTCAGTGGACAGTTCCTGACACTGAGCTGCGAGAGTCTCTGAGGCTTGCAGTTGCTGAAGTGTTGTTACCAGCGTACAGAAATTTCATTAAACGTTTTGGGCCACTGGTTGAGAGTGGGAAGAATCCCCAGAAGTACATTCGATTCACAGCAGAGGATCTGGAACGGATGCTGGGTGAATTTTTTGAGGGTAGAACCTTGAATGAAGCCAAGCGATAA 1944 0.4393 MGVAVGMDALSERAAMMRESVQKSQTISDSIVSILGSFDHRLSALETAMRPTQIRTHSIRRAHENIDKTLKAAEVILAQFDLYRQAEGKVLRGPQEDLESYLESIDQLRSNIRFFSSNKSFKSNDGVVNHANNLLAKAISKLEEEFKQLLSSYSKPVEPDRLFDGLPNSLRPSSGSPGNQADSSIKALSNNHSEHQNSNLETAVYTPPTLIPPRVLPLLHDLAQQMVQAGHQQQLLKIYRDTRSSVFEESLRKLGVEKLSKDDVQKMQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFQGFDSLSDQCFAEVTASSVSVLLSFGEAIARSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACTEIRESALGLTKRLAQTAQETFGDFEEAVEKDATKTAVSDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFENEKETTSQLASVTMRIMHALQTNLDGKSKQYKDPALTHLFLMNNIHYMVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKCLTIQALTSSGGGSTVGTDGGNSSGVSRAMVKDRFKTFNMQFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRNFIKRFGPLVESGKNPQKYIRFTAEDLERMLGEFFEGRTLNEAKR* 648
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0948 647 SUPERFAMILY Cullin repeat-like 76 638 IPR016159 -
Vvi13g0948 647 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 639 IPR004140 GO:0000145|GO:0006887
Vvi13g0948 647 MobiDBLite consensus disorder prediction 161 185 - -
Vvi13g0948 647 Gene3D Exocyst complex component Exo70 74 647 - -
Vvi13g0948 647 Coils Coil 132 152 - -
Vvi13g0948 647 Pfam Exo70 exocyst complex subunit 278 634 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi13g0948 647 MobiDBLite consensus disorder prediction 169 185 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi13g0948 Vvi-Chr13 13478741 13512004 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0948 1 647 EXO70 exocyst subunit family AT5G03540 77.548 0.0 1040
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0948 K07195 - vvi:100253247 1238.4