Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0945 ATGGGGAAGAAAATGAAGCTCCCTTCTCTGTTCAAGGCCAAGGAAACAAAGCAGCCATGGCAATGGCCCTCGTGCAAGCACCCCAAAACCCTTTCTTTTCGAGCTGGGGACGACATGTTCAAGACCGTTAACTCAGTCTTCTTCGATCCCACTGACGGAGTGGAGACTCCTGAGTCTTGGTTCACGAACACGTCCGAGTCTGCAAGCTTCTCCACAGAGTCCGAGGAGGAGTACGGCGTGAAGTCTGTGGAGGTGGTGATACGTGGGGTGCAGTCAGAGAGGCTGTTTTTCGAGCCTGGAAACACTAGTTCAATCTTGGAGGAGAAGGCAAAGGCGGCTAATGAGATTCATCCATTCAAGGAAAGCGTGGTTTTGGCAATGGAGTCTGAGGATCCCTATGTAGATTTCAGGAAGTCAATGGAGGAGATGGTGGAGTCTCATGGGTTGAAGGATTGGGATTGTCTAGAGGAGCTCTTGGGCTGGTATCTGAGGGTGAATGGGAAGAAGAATCATGGGTTTATAGTTGGAGCCTTCGTTGATTTGCTTGTTGGTTTGGCTTCTTGTTCTGATTCCACTTCTTTCTCTTCTGCTGTCTCTTCATTTTCTTCTCCCATTTCAATGTCTTCATCTCAACAACTTCAAGACAAGGACATTGATGATAAGGAGGAAGACGAAGAATAG 681 0.4802 MGKKMKLPSLFKAKETKQPWQWPSCKHPKTLSFRAGDDMFKTVNSVFFDPTDGVETPESWFTNTSESASFSTESEEEYGVKSVEVVIRGVQSERLFFEPGNTSSILEEKAKAANEIHPFKESVVLAMESEDPYVDFRKSMEEMVESHGLKDWDCLEELLGWYLRVNGKKNHGFIVGAFVDLLVGLASCSDSTSFSSAVSSFSSPISMSSSQQLQDKDIDDKEEDEE* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0945 226 MobiDBLite consensus disorder prediction 201 226 - -
Vvi13g0945 226 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 20 186 IPR038933 GO:0045892
Vvi13g0945 226 ProSiteProfiles OVATE domain profile. 125 184 IPR006458 -
Vvi13g0945 226 Pfam Transcriptional repressor, ovate 129 185 IPR006458 -
Vvi13g0945 226 NCBIfam uncharacterized plant-specific domain TIGR01568 123 186 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0945 Vvi-Chr13 13392064 13392744 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vvi13g0945 Ovate 3.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0945 - - vvi:100244711 388.652