Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0932 ATGGAATTTCTTGAAAAAGCAATAGAGTTTGGAGTCTGCAATCAAGGCAAGCTTCTTCAAAAAAAAATTTCAATCCAGATTTGCTTTGAAAATATTCACAAAAGCTACTCCCATCTTCCTCCATTTTCTGAAACTCCGAGATCTGACTTTGTTATGGCGCCAAAGAAAGAAAAGGCTCCTCCACCTTCTTCGAAGCCTGCCAAATCTGGCGGAGGAAAACAGAAAAAGAAGAAATGGAGCAAAGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTCTATTTGACCAAGGAACTTATGATAAGCTTCTTTTGGAGGTTCCCAAGTACAAGCTTATTACTCCTTCAATCCTATCAGACAGGCTGAGGGAAACTCTAGATGCAGTTTTTATCTTATACCATTCATCCATTCGTCAGTATCTCTTTGGTTGGGTTATTGGCATTTCAAATGAACGGGTTTGTGCGTTTAATCTATGTTGCATGGGTTCAAGTATGAGCATTGGATACGGGTCAATGGGTCATTAG 522 0.3966 MEFLEKAIEFGVCNQGKLLQKKISIQICFENIHKSYSHLPPFSETPRSDFVMAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLLEVPKYKLITPSILSDRLRETLDAVFILYHSSIRQYLFGWVIGISNERVCAFNLCCMGSSMSIGYGSMGH* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0932 173 MobiDBLite consensus disorder prediction 53 84 - -
Vvi13g0932 173 Gene3D - 72 125 - -
Vvi13g0932 173 Pfam S25 ribosomal protein 58 122 IPR004977 -
Vvi13g0932 173 PANTHER 40S RIBOSOMAL PROTEIN S25 52 145 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0932 Vvi-Chr13 12751131 12754533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0932 52 122 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 91.549 2.50e-26 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0932 K02975 - vvi:100265344 93.9745