Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0918 ATGGAAGTTGTTGGAGAGGTTGTTCTTTCTGTGTCCCTTGAACTCTTGTTCAGCAAACTGGCCTCCTCTGATTTGTGGAAGTACGCACGCCAAGAGCAAGTCCACACCGAGCTCAAGAAATGGAAGACAAGACTGTTGGAGATTCGGGAAGTGCTCGACGATGCTGAGGACAAGCAGATCACTAAGCAGCACGTGAAAGCATGGCTCGCACATCTCAGGGATTTGGCTTATGATGTGGAGGACGTCTTGGACGAGTTTGGCTACCAAGTGATGAGAAGAAAGTTGCTGGCGGAGGGTGATGCGGCCAGCACAAGCAAGGTACGCAAATTCATCCCTACTTGTTGTACTACTTTCACTCCAATTCAGGCTATGCGGAATGTTAAGCTGGGGTCCAAGATAGAGGACATCACTCGCCGATTAGAAGAAATTTCAGCTCAGAAGGCTGAGCTCGGTTTGGAAAAGCTCAAAGTGCAGATCGGAGGCGCCAGAGCAGCTACTCAAAGCCCAACCCCTCCACCACCTTTGGTATTCAAACCTGGGGTATACGGCAGGGATGAAGATAAAACCAAGATACTAGCCATGCTTAATGATGAATCCCTCGGTGGCAATCTGTCTGTAGTCTCGATCGTGGCCATGGGTGGGATGGGAAAAACTACGCTGGCAGGTCTAGTGTACGATGATGAGGAGACATCCAAACATTTTGCTTTAAAAGCTTGGGTTTGTGTGTCTGATCAATTTCATGTGGAGACCATAACCAGGGCAGTTTTACGGGACATTGCTCCAGGCAACAATGATTCGCCGGACTTTCATCAAATTCAACGCAAACTGAGGGACGAAACCATGGGAAAAAGATTTTTGATTGTTCTTGACGATTTGTGGAATGAGAAATATGATCAATGGGACAGCCTACGCTCCCCTCTCTTGGAGGGAGCACCGGGAAGCAAGATCCTCGTCACCACTCGTAATAAAAATGTTGCAACTATGATGGGAGGAGATAAAAACTTTTATGAGCTAAAACATTTGTCTAACAATGATTGTTGGGAGTTGTTTAAAAAACATGCTTTTGAAAACAGAAATACCAAGGAGCATCCGGACTTGGCATTGATAGGAAGGGAAATTGTAAAGAAGTGTGGAGGCCTGCCCTTGGCAGCAAAAGCACTTGGTGGTCTTCTGCGCCATGAACACAGAGAAGATAAGTGGAATATTATACTAGCAAGCAAAATATGGAATTTACCTGGTGATAAGTGTGGTATTCTTCCTGCGTTGAGATTGAGCTATAATGATCTCCCTTCACATTTAAAAAGGTGTTTCGCTTATTGTGCATTATTTCCCCAAGATTATGAGTTTAAGAAGGAAGAGCTAATCCTCTTGTGGATGGCGGAGGGGTTAATTCAACAATCAAATGAGGATGAGAAAATGGAGGATCTTGGTGATGATTATTTTCGTGAACTATTGTCAAGATCATTTTTCCAATCGTCGAGCAGCAATAAATCACGATTCGTTATGCATGATCTTATTAACGATCTAGCTAATTCTATTGCTGGAGACACATGCTTGCATTTGGATGATGAGTTGTGGAATAATTTGCAATGCCCCGTTTCTGAAAATACTCGTCATTCATCATTCATCCATCATCATTTTGATATCTTTAAAAAATTTGAAAGGTTTGATAAGAAAGAGCGCTTGCGCACTTTCATAGCTTTGCCGATATATGAACCAACTAGGGGATATCTTTTCTGTATAAGTAATAAGGTGCTTGAAGAATTGATACCAAGGTTAAGGCACTTAAGGGTGCTCTCATTGGCTACTTACATGATAAGTGAGATACCTGATTCATTTGATAAGTTGAAACATTTGAGATACCTTAATTTGTCCTACACCAGTATAAAATGGTTACCGGATTCAATTGGTAATCTTTTTTACCTTCAAACATTGAAATTATCATTCTGTGAAGAGCTTATCAGGTTGCCTATTACCATCAGTAACCTAATCAATCTTCGACATCTTGACGTTGCTGGTGCAATAAAATTACAAGAAATGCCTATACGAATGGGCAAACTAAAAGATTTGCGGATATTGTCTAATTTCATTGTGGACAAAAACAACGGTTGGACAATCAAGGAGTTGAAGGACATGTCACATCTGCGAGGAGAACTTTGCATTTCGAAATTGGAAAATGTGGTGAATATTCAAGATGCAAGGGATGCCGATTTAAAATTGAAGCGTAACCTTGAAAGCTTGATAATGCAGTGGAGTTCTGAGCTGGATGGTTCAGGGAATGAAAGGAATCAAATGGATGTCCTTGACTCTCTACCACCTTGTTTGAATCTGAACAAACTGTGCATTAAGTGGTATTGTGGTCCAGAATTCCCACGTTGGATAGGGGATGCCTTGTTCTCTAAGATGGTGGATCTAAGTCTCATAGATTGCAGAAAGTGCACGTCTTTACCATGCTTGGGGCAGTTGCCATCGCTCAAACAGTTGAGGATCCAAGGAATGGATGGAGTAAAAAAAGTGGGTGCAGAGTTTTATGGAGAGACTCGTGTTTCTGCAGGTAAGTTTTTCCCATCACTAGAGTCTCTACATTTTAATAGCATGTCAGAATGGGAGCACTGGGAGGATTGGTCTTCCTCAACAGAGTCATTATTCCCTTGTCTCCATGAGCTTACAATTGAGGATTGCCCCAAATTGATTATGAAACTACCCACTTACCTACCTTCTCTTACAAAGCTCTCTGTTCACTTTTGTCCAAAATTGGAGTCTCCACTTTCAAGACTTCCACTGCTGAAGGAATTACAAGTAAGAGGATGTAATGAGGCGATCTTGAGCAGTGGAAATGACCTCACCTCACTCACCAAGTTAACAATTTCTGGGATTTCAGGGCTTATCAAATTGCATGAAGGATTTGTGCAATTTTTGCAAGGGCTTCGGGTTTTGAAAGTATGGGAATGCGAAGAACTCGAATATTTGTGGGAGGATGGTTTTGGATCGGAAAACTCTCATTCTCTTGAGATTAGAGATTGTGACCAACTTGTATCCTTGGGATGCAATCTTCAGTCTTTGGAAATAATTAAATGTGATAAACTAGAGAGGCTTCCAAATGGATGGCAGAGTCTAACATGCCTTGAAGAATTGACAATCAGGAATTGTCCAAAGCTAGCGTCATTTCCAGATGTAGGTTTCCCACCAATGCTGAGAAATCTTATTCTTGATAATTGTGAAGGTCTTGAGTGTCTACCTGATGAAATGATGTTGAAGATGAGGAACGACAGTACTGACAGCAACAACTTGTGTCTCCTTGAAGAGCTAGTGATATACAGCTGTCCATCTCTCATTTGCTTTCCAAAAGGGCAATTACCCACCACCCTTAAGAGTCTAAGCATATCGTCTTGTGAAAATCTCAAGTCACTTCCAGAAGGAATGATGGGCATGTGTGCCCTTGAAGGCTTATTCATAGATAGGTGTCATTCTCTTATTGGATTACCGAAAGGTGGGTTACCCGCCACTCTCAAGAGACTCAGAATAGCTGATTGTAGAAGGCTAGAGTCTCTACCAGAGGGAATAATGCACCAACATTCCACCAATGCTGCTGCTCTCCAAGCCTTGGAAATCCGTAAATGTCCATCTCTCACATCCTTCCCAAGAGGCAAGTTTCCATCCACCCTTGAGCGACTTCACATTGGGGATTGTGAACACCTCGAGTCAATTTCAGAGGAGATGTTTCACTCTACTAATAATTCACTTCAATCTTTAACCCTCAGGAGGTATCCTAATCTCAAAACCCTACCAGATTGCCTCAACACCCTCACAGATCTACGTATTGTAGATTTTGAAAATCTGGAATTGTTGCTTCCTCAGATAAAAAACCTCACTCGTCTTACATCGCTTCACATTCGTAATTGTGAGAATATCAAGACCCCCCTAACCCAATGGGGCCTTTCCAGACTCGCCTCTCTTAAAGACCTCTGGATTGGAGGCATGTTTCCAGATGCAACTTCCTTTTCGGTTGACCCCCACTCGATTCTTTTTCCTACAACTCTCACCTCCCTTACCCTTTCACATTTCCAGAATCTGGAATCCCTAGCCTCCCTGTCTCTCCAAACCCTCACCTCTCTTGAATATCTACAAATCGAAAGTTGCCCTAAGCTCCGGTCGATTTTGCCAAGGGAAGGACTATTGCCTGACACCCTTTCACGACTGGATATGAGGCGTTGCCCACATCTAACACAAAGGTACTCGAAGGAGGAAGGAGATGATTGGCCCAAGATTGCCCACATCCCCTATGTGGAGATAATGACTAATCCATCTGAGTAA 4314 0.427 MEVVGEVVLSVSLELLFSKLASSDLWKYARQEQVHTELKKWKTRLLEIREVLDDAEDKQITKQHVKAWLAHLRDLAYDVEDVLDEFGYQVMRRKLLAEGDAASTSKVRKFIPTCCTTFTPIQAMRNVKLGSKIEDITRRLEEISAQKAELGLEKLKVQIGGARAATQSPTPPPPLVFKPGVYGRDEDKTKILAMLNDESLGGNLSVVSIVAMGGMGKTTLAGLVYDDEETSKHFALKAWVCVSDQFHVETITRAVLRDIAPGNNDSPDFHQIQRKLRDETMGKRFLIVLDDLWNEKYDQWDSLRSPLLEGAPGSKILVTTRNKNVATMMGGDKNFYELKHLSNNDCWELFKKHAFENRNTKEHPDLALIGREIVKKCGGLPLAAKALGGLLRHEHREDKWNIILASKIWNLPGDKCGILPALRLSYNDLPSHLKRCFAYCALFPQDYEFKKEELILLWMAEGLIQQSNEDEKMEDLGDDYFRELLSRSFFQSSSSNKSRFVMHDLINDLANSIAGDTCLHLDDELWNNLQCPVSENTRHSSFIHHHFDIFKKFERFDKKERLRTFIALPIYEPTRGYLFCISNKVLEELIPRLRHLRVLSLATYMISEIPDSFDKLKHLRYLNLSYTSIKWLPDSIGNLFYLQTLKLSFCEELIRLPITISNLINLRHLDVAGAIKLQEMPIRMGKLKDLRILSNFIVDKNNGWTIKELKDMSHLRGELCISKLENVVNIQDARDADLKLKRNLESLIMQWSSELDGSGNERNQMDVLDSLPPCLNLNKLCIKWYCGPEFPRWIGDALFSKMVDLSLIDCRKCTSLPCLGQLPSLKQLRIQGMDGVKKVGAEFYGETRVSAGKFFPSLESLHFNSMSEWEHWEDWSSSTESLFPCLHELTIEDCPKLIMKLPTYLPSLTKLSVHFCPKLESPLSRLPLLKELQVRGCNEAILSSGNDLTSLTKLTISGISGLIKLHEGFVQFLQGLRVLKVWECEELEYLWEDGFGSENSHSLEIRDCDQLVSLGCNLQSLEIIKCDKLERLPNGWQSLTCLEELTIRNCPKLASFPDVGFPPMLRNLILDNCEGLECLPDEMMLKMRNDSTDSNNLCLLEELVIYSCPSLICFPKGQLPTTLKSLSISSCENLKSLPEGMMGMCALEGLFIDRCHSLIGLPKGGLPATLKRLRIADCRRLESLPEGIMHQHSTNAAALQALEIRKCPSLTSFPRGKFPSTLERLHIGDCEHLESISEEMFHSTNNSLQSLTLRRYPNLKTLPDCLNTLTDLRIVDFENLELLLPQIKNLTRLTSLHIRNCENIKTPLTQWGLSRLASLKDLWIGGMFPDATSFSVDPHSILFPTTLTSLTLSHFQNLESLASLSLQTLTSLEYLQIESCPKLRSILPREGLLPDTLSRLDMRRCPHLTQRYSKEEGDDWPKIAHIPYVEIMTNPSE* 1438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0918 1437 PANTHER DISEASE RESISTANCE PROTEIN RP 38 894 IPR044974 GO:0006952
Vvi13g0918 1437 Gene3D Ribonuclease Inhibitor 1016 1167 IPR032675 -
Vvi13g0918 1437 Gene3D Ribonuclease Inhibitor 578 738 IPR032675 -
Vvi13g0918 1437 Gene3D Ribonuclease Inhibitor 739 921 IPR032675 -
Vvi13g0918 1437 Gene3D Ribonuclease Inhibitor 1279 1416 IPR032675 -
Vvi13g0918 1437 Gene3D Ribonuclease Inhibitor 1168 1278 IPR032675 -
Vvi13g0918 1437 FunFam Probable disease resistance protein At1g61300 173 334 - -
Vvi13g0918 1437 Gene3D - 425 512 IPR036388 -
Vvi13g0918 1437 Gene3D - 12 127 - -
Vvi13g0918 1437 SUPERFAMILY L domain-like 996 1098 - -
Vvi13g0918 1437 Pfam Rx N-terminal domain 8 103 IPR041118 -
Vvi13g0918 1437 SUPERFAMILY L domain-like 1093 1424 - -
Vvi13g0918 1437 Gene3D - 340 424 IPR042197 -
Vvi13g0918 1437 CDD RX-CC_like 34 144 IPR038005 -
Vvi13g0918 1437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 440 IPR027417 -
Vvi13g0918 1437 Coils Coil 126 153 - -
Vvi13g0918 1437 FunFam Probable disease resistance protein At1g63360 426 512 - -
Vvi13g0918 1437 PRINTS Disease resistance protein signature 206 221 - -
Vvi13g0918 1437 PRINTS Disease resistance protein signature 377 391 - -
Vvi13g0918 1437 PRINTS Disease resistance protein signature 637 653 - -
Vvi13g0918 1437 PRINTS Disease resistance protein signature 279 293 - -
Vvi13g0918 1437 SUPERFAMILY L domain-like 493 986 - -
Vvi13g0918 1437 Gene3D - 172 336 IPR027417 -
Vvi13g0918 1437 Coils Coil 38 58 - -
Vvi13g0918 1437 Pfam NB-ARC domain 188 403 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0918 Vvi-Chr13 11975738 11980051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0918 180 694 WRKY Transcription Factor Family AT5G45050 24.512 7.12e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0918 - - vvi:100256901 2802.7