Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0898 ATGGATGCTGCACTCCCTGATGAGGTTCTAAGGCCATCAAGGCCTGACTTAGAAAAGAAATTGGCATGGCGCGCTTTTGTTAAATCTGCAGAGACAATCTTTGAGATGGTTCAAGCAACAATCATGCTCGAGGACATGATTAAGATTGAATACTTGATGAATGGATGGTGGTATTGGTCATCACTCTCTACTGCTGCCAAGACTTCTATCGTTTCTTCCCTTGCCCTCTGCATATACTCTCTGGATGCTGCCATTGCTTATGAGAAGATCTCATTTAATTTGGATGACTGGCAGTCCCTCGCTCATCCAGAAATGACAGTATCTCCCACTCAGCAGATGCCACATGCAGAACAGCCAATTCCTCCATAA 369 0.4472 MDAALPDEVLRPSRPDLEKKLAWRAFVKSAETIFEMVQATIMLEDMIKIEYLMNGWWYWSSLSTAAKTSIVSSLALCIYSLDAAIAYEKISFNLDDWQSLAHPEMTVSPTQQMPHAEQPIPP* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0898 122 PANTHER OS02G0192300 PROTEIN 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi13g0898 Vvi-Chr13 11423097 11423465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0898 1 89 C2H2 Transcription Factor Family AT3G01460 62.921 3.74e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0898 K22768 - vvi:100245816 170.629