Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi13g0892 ATGGGTGTGGGAATATCAGTTTTGATAGGATTGAAGGCGACAGCGATGTTCTTTTTGTTTGCATCCCTTAGAATCTATGGTTTCACATTTTTATCCATGCCCTTTTTGTATGCTTCTCTAGTTTCTTTATTAGTATCCATAGCTGCTCACCCCTCGATCAATCTCCCCATGCTTCTGGGGAAGAACCCAGATGGGAGTTTTCCCATCTGGGCAATTATTATGTTCAGTCCATTCTTGTATTTTGTTCGATTGTTTTCCATTCTGCGAAGATTCAGTAATAGGGAAGAGCCTTATACCGAAATTTATGAGGGTATCTATGTTGGAGGGTGGCCTTCTTCGCCTGATAATTTGCCACCCGGTGACCCTGCCATTGTGGATTGCACTTGTGAGTTTCCCAGGGCTTCGCATTCTGTGGGGAATGCTTATCTTTGCGTTCCAACTTGGGACACGAGGTCTCCTCAACCTTCTGAAATTGAAATGGCTGTTCGATGGGCTTGTCGAAAGAGAGAGCAGAAAAGGCCCATCTTTGTTCATTGTGCATATGGTCATGGAAGAAGTGTTTGTGTGATGTGCGCACTATTAGTCGCTCTGGGCGTGGCAGAAGATTGGAAAAACGCTGAGAAGTTAATCAGAGAAAAACGACCTTATATTCAAATGAATGCCCTCCATCGCAAAGCCTTGGAAGAATGGTCGAAACACCGGCTGTCTTCTCCTAAAAGGAACGAGGAAATGGATGTAAGTTGTGTAATTAGGTCTAATGCTTCTGGAGGATCAATCAGATAG 783 0.4393 MGVGISVLIGLKATAMFFLFASLRIYGFTFLSMPFLYASLVSLLVSIAAHPSINLPMLLGKNPDGSFPIWAIIMFSPFLYFVRLFSILRRFSNREEPYTEIYEGIYVGGWPSSPDNLPPGDPAIVDCTCEFPRASHSVGNAYLCVPTWDTRSPQPSEIEMAVRWACRKREQKRPIFVHCAYGHGRSVCVMCALLVALGVAEDWKNAEKLIREKRPYIQMNALHRKALEEWSKHRLSSPKRNEEMDVSCVIRSNASGGSIR* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi13g0892 260 SMART dsp_5 97 233 IPR020422 GO:0006470|GO:0008138
Vvi13g0892 260 CDD DSP_bac 94 232 - -
Vvi13g0892 260 Gene3D Protein tyrosine phosphatase superfamily 98 236 IPR029021 -
Vvi13g0892 260 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 156 225 IPR000387 GO:0016311|GO:0016791
Vvi13g0892 260 Pfam Dual specificity phosphatase, catalytic domain 124 232 IPR000340 GO:0008138|GO:0016311
Vvi13g0892 260 PANTHER - 3 243 - -
Vvi13g0892 260 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 81 235 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi13g0892 142 238 Protein tyrosine phosphatase (PTP) family AT5G56610 30.693 5.15e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi13g0892 - - vvi:100261330 537.724